- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g28307.01.t
Possible name(s)
ELP3; RSAD1
Gene model
Location
chr10 [20,234,147 / 20,235,752]
Amino acid sequence
Length: 534
>Boschl.CG.Botznik2013.chr10.g28307.01.p
MMAVTIADIINQLIEAHEKKQDVNLNKLKCKISSKYGLSSQPRLTDIIAAVPHRYKKVLL
PKLRAKPVRTASGVAIVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPT
SMRAIRARYDPYLQTRHRVEQLKQLGHNVDKVEFIVMGGTFMSLPETYRDYFIRNLHDAL
SGHTSNDVKEAVKYSERSNTKCIGITIETRPDYCLKKHLSDMLLYGCTRLEIGVQSVYED
VARDTNRGHTVKAVTESFQLSKDAGFKVVAHMMPDLPNVDLERDIEQFVEFFENPQFRPD
GMKLYPTLVIRGTGLYELWKTGRYRSYPPSTLVDLVARILALVPPWTRVYRVQRDIPMPL
VTSGVEHGNLRELALARMQDFGTKCRDVRTREVGIQEIHQKVQPYEVELIRRDYVANGGW
EVFLSYEDPQQDILIGLLRLRKCSDDSSRPEVKGKGVSIVRELHVYGSVVPVSSRDPGKF
QHQGFGTLLMEEAERIASEEHGSSKILVISGVGTRNYYRKLGYELDGPYMAKNL
Nucleotide sequence
Length: 1,605
>Boschl.CG.Botznik2013.chr10.g28307.01.t
AATGATGGCCGTCACGATTGCTGACATCATCAACCAGCTCATCGAAGCACACGAGAAAAA
ACAGGACGTAAATCTAAACAAATTGAAATGCAAGATCTCCAGCAAGTACGGACTCTCTTC
TCAGCCTCGGTTAACCGATATTATTGCTGCAGTGCCGCACAGATACAAAAAAGTATTACT
CCCCAAACTACGCGCAAAGCCAGTCCGAACTGCCAGTGGTGTTGCGATTGTGGCTGTAAT
GTGCAAACCTCATCGATGTCCACACATTAACATGACTGGGAATATATGTGTGTATTGCCC
TGGCGGCCCGGACTCTGATTTTGAATATTCAACGCAATCTTATACCGGTTATGAGCCGAC
CTCAATGAGAGCTATCCGAGCTCGCTACGACCCTTATCTGCAGACGCGTCACAGAGTGGA
ACAACTGAAGCAGCTCGGTCATAACGTAGACAAAGTTGAATTCATAGTAATGGGTGGCAC
TTTCATGTCTCTACCGGAAACATACAGAGATTACTTCATTCGAAATCTGCACGATGCATT
GTCGGGTCACACAAGCAACGATGTAAAAGAAGCTGTGAAATATTCTGAAAGGAGCAACAC
AAAATGTATTGGAATTACGATCGAGACACGGCCAGACTACTGTCTTAAGAAACATCTTAG
CGATATGCTTCTTTATGGATGCACTCGACTTGAAATCGGAGTGCAGAGTGTGTATGAAGA
TGTTGCACGCGACACTAACCGTGGTCACACGGTGAAAGCAGTCACTGAGAGCTTTCAATT
GTCAAAAGATGCGGGCTTCAAAGTTGTTGCACACATGATGCCCGATCTGCCTAATGTCGA
CCTCGAGAGAGACATCGAACAGTTTGTCGAGTTCTTTGAAAATCCTCAATTTCGGCCGGA
TGGCATGAAATTATACCCTACTTTAGTGATACGCGGCACTGGTCTTTATGAGCTATGGAA
AACAGGTCGATATAGGAGCTATCCTCCGTCTACGTTGGTAGACTTGGTGGCACGTATCCT
CGCGCTAGTACCGCCTTGGACCAGAGTATACAGAGTACAACGTGACATCCCAATGCCGTT
AGTTACGTCCGGTGTGGAGCATGGAAATTTACGAGAACTCGCCTTGGCGAGGATGCAAGA
CTTCGGCACAAAGTGTCGGGACGTGCGAACGCGAGAAGTTGGCATTCAAGAAATTCACCA
AAAAGTACAGCCGTATGAGGTGGAACTGATCAGAAGAGACTACGTCGCGAACGGCGGATG
GGAAGTGTTTCTGAGTTACGAGGATCCGCAACAGGACATACTAATCGGACTTCTCAGACT
TCGTAAATGCTCTGACGACTCTTCCAGACCTGAGGTGAAGGGTAAAGGCGTGTCGATTGT
CCGAGAGTTGCATGTATACGGCAGCGTTGTGCCGGTAAGCTCACGGGACCCCGGAAAATT
TCAGCACCAAGGATTTGGAACTTTGTTGATGGAAGAGGCGGAAAGAATCGCGAGCGAAGA
GCACGGCTCCTCAAAAATTCTTGTAATTTCCGGCGTGGGGACTAGAAACTATTACCGAAA
ACTTGGGTATGAACTGGATGGGCCTTATATGGCAAAAAATTTGTG
| PIRSF |
ELP3-like (IPR034687) - T[1-534] 5.7E-250 |
| PANTHER |
ELP3-like (IPR034687) - T[2-524] 5.2E-254 |
| TIGRFAM |
ELP3-like (IPR034687) - T[15-534] 1.0E-229 |
| SFLD |
ELP3-like (IPR034687) - T[23-534] 0.0 |
| SMART |
Elp3/MiaB/NifB (IPR006638) - T[76-338] 2.8E-33 |
| Gene3D |
rSAM_horseshoe (IPR023404) - T[88-343] 1.6E-13 |
| Pfam |
rSAM (IPR007197) - T[94-290] 7.7E-20 |
| Pfam |
Radical_SAM_C (IPR032432) - T[299-379] 2.4E-33 |
| SUPERFAMILY |
Acyl_CoA_acyltransferase (IPR016181) - T[339-529] 1.51E-10 |
| ProSiteProfiles |
GNAT_dom (IPR000182) - T[383-534] 10.59 |
| Pfam |
GNAT_dom (IPR000182) - T[385-523] 7.4E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ELP3_HUMAN | 84.644 % | 942 | 0 |