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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr10.g28307.01.t

Possible name(s)

ELP3; RSAD1

Location

chr10 [20,234,147 / 20,235,752]

Sequences

Amino acid sequence

Length: 534

>Boschl.CG.Botznik2013.chr10.g28307.01.p
MMAVTIADIINQLIEAHEKKQDVNLNKLKCKISSKYGLSSQPRLTDIIAAVPHRYKKVLL
PKLRAKPVRTASGVAIVAVMCKPHRCPHINMTGNICVYCPGGPDSDFEYSTQSYTGYEPT
SMRAIRARYDPYLQTRHRVEQLKQLGHNVDKVEFIVMGGTFMSLPETYRDYFIRNLHDAL
SGHTSNDVKEAVKYSERSNTKCIGITIETRPDYCLKKHLSDMLLYGCTRLEIGVQSVYED
VARDTNRGHTVKAVTESFQLSKDAGFKVVAHMMPDLPNVDLERDIEQFVEFFENPQFRPD
GMKLYPTLVIRGTGLYELWKTGRYRSYPPSTLVDLVARILALVPPWTRVYRVQRDIPMPL
VTSGVEHGNLRELALARMQDFGTKCRDVRTREVGIQEIHQKVQPYEVELIRRDYVANGGW
EVFLSYEDPQQDILIGLLRLRKCSDDSSRPEVKGKGVSIVRELHVYGSVVPVSSRDPGKF
QHQGFGTLLMEEAERIASEEHGSSKILVISGVGTRNYYRKLGYELDGPYMAKNL

Nucleotide sequence

Length: 1,605

>Boschl.CG.Botznik2013.chr10.g28307.01.t
AATGATGGCCGTCACGATTGCTGACATCATCAACCAGCTCATCGAAGCACACGAGAAAAA
ACAGGACGTAAATCTAAACAAATTGAAATGCAAGATCTCCAGCAAGTACGGACTCTCTTC
TCAGCCTCGGTTAACCGATATTATTGCTGCAGTGCCGCACAGATACAAAAAAGTATTACT
CCCCAAACTACGCGCAAAGCCAGTCCGAACTGCCAGTGGTGTTGCGATTGTGGCTGTAAT
GTGCAAACCTCATCGATGTCCACACATTAACATGACTGGGAATATATGTGTGTATTGCCC
TGGCGGCCCGGACTCTGATTTTGAATATTCAACGCAATCTTATACCGGTTATGAGCCGAC
CTCAATGAGAGCTATCCGAGCTCGCTACGACCCTTATCTGCAGACGCGTCACAGAGTGGA
ACAACTGAAGCAGCTCGGTCATAACGTAGACAAAGTTGAATTCATAGTAATGGGTGGCAC
TTTCATGTCTCTACCGGAAACATACAGAGATTACTTCATTCGAAATCTGCACGATGCATT
GTCGGGTCACACAAGCAACGATGTAAAAGAAGCTGTGAAATATTCTGAAAGGAGCAACAC
AAAATGTATTGGAATTACGATCGAGACACGGCCAGACTACTGTCTTAAGAAACATCTTAG
CGATATGCTTCTTTATGGATGCACTCGACTTGAAATCGGAGTGCAGAGTGTGTATGAAGA
TGTTGCACGCGACACTAACCGTGGTCACACGGTGAAAGCAGTCACTGAGAGCTTTCAATT
GTCAAAAGATGCGGGCTTCAAAGTTGTTGCACACATGATGCCCGATCTGCCTAATGTCGA
CCTCGAGAGAGACATCGAACAGTTTGTCGAGTTCTTTGAAAATCCTCAATTTCGGCCGGA
TGGCATGAAATTATACCCTACTTTAGTGATACGCGGCACTGGTCTTTATGAGCTATGGAA
AACAGGTCGATATAGGAGCTATCCTCCGTCTACGTTGGTAGACTTGGTGGCACGTATCCT
CGCGCTAGTACCGCCTTGGACCAGAGTATACAGAGTACAACGTGACATCCCAATGCCGTT
AGTTACGTCCGGTGTGGAGCATGGAAATTTACGAGAACTCGCCTTGGCGAGGATGCAAGA
CTTCGGCACAAAGTGTCGGGACGTGCGAACGCGAGAAGTTGGCATTCAAGAAATTCACCA
AAAAGTACAGCCGTATGAGGTGGAACTGATCAGAAGAGACTACGTCGCGAACGGCGGATG
GGAAGTGTTTCTGAGTTACGAGGATCCGCAACAGGACATACTAATCGGACTTCTCAGACT
TCGTAAATGCTCTGACGACTCTTCCAGACCTGAGGTGAAGGGTAAAGGCGTGTCGATTGT
CCGAGAGTTGCATGTATACGGCAGCGTTGTGCCGGTAAGCTCACGGGACCCCGGAAAATT
TCAGCACCAAGGATTTGGAACTTTGTTGATGGAAGAGGCGGAAAGAATCGCGAGCGAAGA
GCACGGCTCCTCAAAAATTCTTGTAATTTCCGGCGTGGGGACTAGAAACTATTACCGAAA
ACTTGGGTATGAACTGGATGGGCCTTATATGGCAAAAAATTTGTG

InterProScan

PIRSF
ELP3-like (IPR034687) - T[1-534] 5.7E-250
PANTHER
ELP3-like (IPR034687) - T[2-524] 5.2E-254
TIGRFAM
ELP3-like (IPR034687) - T[15-534] 1.0E-229
SFLD
ELP3-like (IPR034687) - T[23-534] 0.0
SMART
Elp3/MiaB/NifB (IPR006638) - T[76-338] 2.8E-33
Gene3D
rSAM_horseshoe (IPR023404) - T[88-343] 1.6E-13
Pfam
rSAM (IPR007197) - T[94-290] 7.7E-20
Pfam
Radical_SAM_C (IPR032432) - T[299-379] 2.4E-33
SUPERFAMILY
Acyl_CoA_acyltransferase (IPR016181) - T[339-529] 1.51E-10
ProSiteProfiles
GNAT_dom (IPR000182) - T[383-534] 10.59
Pfam
GNAT_dom (IPR000182) - T[385-523] 7.4E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ELP3_HUMAN 84.644 % 942 0