- Transcript 'KH2012:KH.L154.4.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g28649.01.t
Possible name(s)
OGT; TMTC1; TMTC2
Gene model
Location
chr10 [20,308,700 / 20,310,522]
Amino acid sequence
Length: 179
>Boschl.CG.Botznik2013.chr10.g28649.01.p
QCLHKVGRMPEAEKWFKLSLRSKSDHVPAHLTYALLLRDEDRTLEAKRLYETAIALDPRG
HLAFNHYAKLLIREENFAHAARIIEMALVTTSGTSDYDTVMLAGDIFRLLQDDSKAEKYY
RTATQILPLVEAGHINLGAVLHLRGKYAEARTCYQKALSLNPGSETAMRNLQRVQNLMD
Nucleotide sequence
Length: 542
>Boschl.CG.Botznik2013.chr10.g28649.01.t
TCAATGTCTTCACAAAGTCGGACGAATGCCGGAAGCCGAGAAGTGGTTCAAGTTGTCCCT
CCGTTCAAAATCAGACCACGTCCCCGCTCATTTGACGTACGCACTGCTGCTCAGAGATGA
AGACAGAACATTAGAAGCGAAGCGACTTTACGAAACAGCGATCGCGTTGGATCCTCGCGG
CCATCTAGCGTTCAATCATTACGGCAAATTGTTAATCCGCGAGGAAAACTTTGCCCACGC
GGCGCGCATAATCGAAATGGCGCTGGTCACGACATCAGGAACTTCCGATTACGACACGGT
CATGCTCGCGGGGGACATATTTCGACTCTTACAAGACGATTCGAAAGCAGAAAAATATTA
TCGTACCGCGACGCAGATCCTGCCTCTGGTCGAGGCAGGCCACATCAATTTGGGAGCTGT
CCTGCATCTGCGAGGTAAATACGCGGAAGCAAGGACTTGTTATCAGAAGGCTCTCAGCTT
GAACCCGGGCAGCGAAACGGCAATGCGAAACCTGCAAAGAGTCCAAAACTTGATGGACTA
AT
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[1-164] 24.318 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-179] 3.8E-29 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[2-171] 2.28E-23 |
| SMART |
TPR_repeat (IPR019734) - T[27-60] 140.0 - T[97-130] 96.0 - T[131-164] 6.4E-6 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[27-60] 6.785 - T[97-130] 5.753 - T[131-164] 10.355 |
| Pfam |
TPR_1 (IPR001440) - T[134-163] 6.6E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMTC2_HUMAN | 37.989 % | 117 | 8.95E-31 |