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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g32540.01.t
Possible name(s)
OGT; TMTC1; TMTC2
Gene model
Location
chr10 [21,350,529 / 21,357,453]
Amino acid sequence
Length: 453
>Boschl.CG.Botznik2013.chr10.g32540.01.p
MYRLTITIDDVGLRDPASHSKAKISALYNLGRLLSSQRRHNEAIRAFEDAVERLTPDYEP
HSLYNMLGQCLHKVGRMPEAEKWFKLSLRSKSDHVPAHLTYALLLRDEDRTLEAKRLYET
AIALDPRGHLAFNHYAKLLIREENFAHAARIIEMALVTTSGTSDYDTVMLAGDIFRLLQD
DSKAEKYYRTATQILPLVEAGHINLGAVLHLRATNMDSHRASVSTLFGENVSIASSASDG
LFDNVLLGDEDREKRHFFLSVRCNGLMKNKHFAECIPMLERLVTVEKKQWFKLKAQLKLQ
ECIIRCDMKQRAQLEMEKTRKLAVAIPDMNFEDAVSLATEYEQQRSYLHAISIYICAIDI
TETSLSRNSSCDNVTEGFLRVRNIAQCLKNSLDEAKSLTCALSADCLIELLEKLIAKSRL
CEAHVEAVCLNNIGITLSIAGKLRDAETYFRLR
Nucleotide sequence
Length: 1,360
>Boschl.CG.Botznik2013.chr10.g32540.01.t
GATGTATCGTCTCACGATTACCATCGACGATGTCGGTCTGCGCGATCCCGCGTCTCATTC
GAAAGCGAAGATATCGGCCTTGTACAATCTCGGGCGTTTGTTATCGTCACAACGTCGTCA
CAACGAAGCGATACGGGCCTTCGAAGACGCTGTGGAGAGGCTGACGCCAGACTACGAACC
GCACAGCTTATACAATATGCTAGGTCAATGTCTTCACAAAGTCGGACGAATGCCGGAAGC
CGAGAAGTGGTTCAAGTTGTCCCTCCGTTCAAAATCAGACCACGTCCCCGCTCATTTGAC
GTACGCACTGCTGCTCAGAGATGAAGACAGAACATTAGAAGCGAAGCGACTTTACGAAAC
AGCGATCGCGTTGGATCCTCGCGGCCATCTAGCGTTCAATCATTACGCCAAATTGTTAAT
CCGCGAGGAAAACTTTGCCCACGCGGCGCGCATAATCGAAATGGCGCTGGTCACGACATC
AGGAACTTCCGATTACGACACGGTCATGCTCGCGGGGGACATATTTCGACTCTTACAAGA
CGATTCGAAAGCAGAAAAATATTATCGTACCGCGACGCAGATCCTGCCTCTGGTCGAGGC
AGGCCACATCAATTTGGGAGCTGTCCTGCATCTGCGAGCAACGAACATGGACTCGCATCG
AGCCAGCGTTTCTACTCTATTCGGTGAGAATGTATCAATTGCTTCGTCTGCATCGGATGG
TTTGTTTGACAATGTTTTATTGGGCGATGAGGACCGAGAAAAGAGACATTTCTTCCTATC
CGTGCGATGCAATGGACTGATGAAAAATAAACATTTCGCCGAATGCATCCCTATGCTGGA
ACGACTCGTAACCGTAGAAAAAAAACAGTGGTTCAAACTCAAAGCGCAGTTGAAACTTCA
GGAATGTATCATCAGATGCGACATGAAGCAAAGGGCACAGTTGGAGATGGAAAAGACGAG
GAAACTCGCAGTCGCAATTCCCGATATGAATTTCGAAGATGCCGTAAGCCTGGCTACTGA
ATACGAGCAACAGAGATCATACTTGCATGCCATATCTATTTACATTTGCGCGATAGATAT
AACGGAAACAAGTTTGTCCCGTAATAGCAGCTGCGACAACGTTACAGAGGGCTTCCTTCG
AGTACGAAATATTGCGCAGTGTCTCAAGAACAGCCTTGACGAAGCTAAGTCTTTAACCTG
CGCATTATCAGCAGATTGCTTGATAGAATTACTTGAAAAACTCATCGCGAAAAGTCGACT
TTGCGAAGCGCATGTTGAAGCCGTCTGTCTGAACAATATTGGGATAACACTTTCGATTGC
TGGAAAATTGCGAGACGCCGAAACTTATTTTCGACTGAGA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[13-221] 1.1E-27 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[24-57] 8.585 - T[61-94] 6.815 - T[95-128] 6.785 - T[165-198] 5.753 |
| SMART |
TPR_repeat (IPR019734) - T[24-57] 0.59 - T[61-94] 3.6 - T[95-128] 140.0 - T[165-198] 96.0 - T[331-364] 280.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[24-198] 21.96 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[25-196] 2.49E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMTC2_HUMAN | 38.571 % | 152 | 1.13E-39 |