- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g40155.01.t
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
chr10 [13,080,293 / 13,090,682]
Amino acid sequence
Length: 445
>Boschl.CG.Botznik2013.chr10.g40155.01.p
VDFVTHLLSRMCHHQHGQINSYLKPMLQRDFITALPGRGMPHVAENILTYLDAKSLCAAE
LVCHTWYRVIQEGMLWKRLIERNXXTDSLWKGLSERMGWSQFLFKGIPGQPAPDSYFRGL
YPQIIQAIEKIEHNWRLGRHRLEKIQCRSENSKGVYCLQYDDDKIVSGLRDNTIKMWNRK
SLENVKVLTGHTGSVLCLQYDERVIITGSSDSTVRVWDIHTGDMVNTLVHHCEAVLHLRF
ADGLMVTCSKDRSIAVWDMVSPAQIDMRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVW
NTSTCEFVRTLNGHKRGIACLQYRERLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC
IRFDNKRIVSGAYDGKIKVWDLQAALDPRSPAGSLCLRTLVEHTGRVFRLQFDEFQIVSS
SHDDSILIWDFLNVEDEPHKNPIPP
Nucleotide sequence
Length: 1,338
>Boschl.CG.Botznik2013.chr10.g40155.01.t
TTGATTTTGTAACGCATTTATTATCACGTATGTGCCATCACCAGCACGGTCAAATCAATT
CATATCTGAAGCCCATGCTACAGAGAGATTTCATAACCGCACTTCCAGGCCGGGGCATGC
CGCATGTGGCCGAAAATATTTTAACTTACCTTGACGCCAAGTCGCTATGCGCCGCGGAGC
TGGTGTGTCACACATGGTATCGGGTCATTCAAGAAGGAATGCTTTGGAAAAGGCTAATTG
AGAGAAACGTNCGNACCGATTCTTTATGGAAGGGGTTGTCGGAAAGAATGGGCTGGTCGC
AGTTTTTATTCAAAGGCATTCCGGGACAGCCAGCGCCCGATTCCTATTTTCGAGGCTTGT
ATCCTCAAATAATCCAGGCTATAGAGGAAATCGAACACAATTGGCGGCTCGGACGGCATC
GGCTAGAAAAGATCCAGTGTCGCAGCGAAAATAGCAAGGGCGTCTACTGTCTGCAGTACG
ACGACGACAAAATAGTTTCCGGCCTGCGCGATAACACGATCAAAATGTGGAACCGGAAAA
GTCTCGAAAACGTCAAGGTTCTAACGGGCCACACGGGTTCGGTGCTATGTCTCCAGTATG
ACGAAAGAGTTATTATAACGGGATCTTCCGATTCCACAGTGCGGGTATGGGATATTCACA
CGGGAGACATGGTAAACACACTAGTCCATCATTGTGAAGCGGTTTTACATCTTAGATTTG
CAGACGGCCTTATGGTGACTTGCTCGAAGGATCGGTCTATCGCCGTGTGGGACATGGTAT
CACCGGCGCAAATCGACATGCGTAGAGTTTTAGTTGGGCACAGGGCTGCTGTTAACGTGG
TGGATTTTGATGACAAATACATTGTGTCTGCCTCGGGGGATCGTACAATCAAGGTGTGGA
ATACTTCTACTTGCGAATTTGTCCGTACTCTCAACGGTCACAAACGAGGAATCGCGTGTC
TGCAGTACAGAGAGAGACTCGTGGTCAGCGGTTCTTCAGATAATACAATCAGGCTATGGG
ACATCGAATGCGGTGCTTGCCTACGGGTGCTAGAGGGCCACGAGGAGCTTGTGCGATGTA
TACGGTTTGATAACAAAAGAATTGTCAGCGGCGCTTATGACGGGAAAATTAAAGTGTGGG
ATTTGCAGGCTGCGTTGGATCCGAGATCGCCTGCGGGCTCGCTATGCCTCAGAACACTTG
TCGAACACACCGGGCGAGTCTTTCGACTGCAATTCGATGAATTCCAAATAGTCAGCAGTT
CTCACGATGATTCGATTTTGATATGGGACTTCTTGAATGTAGAAGACGAACCACACAAGA
ATCCGATCCCGCCATGAA
| Pfam |
Beta-TrCP_D (IPR021977) - T[1-28] 1.8E-16 |
| SMART |
Beta-TrCP_D (IPR021977) - T[1-28] 5.7E-10 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[24-136] 1.96E-23 |
| SMART |
F-box_dom (IPR001810) - T[40-79] 4.6E-7 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[43-79] 8.676 |
| Pfam |
F-box_dom (IPR001810) - T[44-79] 3.4E-8 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[135-429] 1.7E-106 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[139-430] 4.07E-73 |
| SMART |
WD40_repeat (IPR001680) - T[141-178] 0.054 - T[181-218] 1.2E-7 - T[221-258] 5.9E-4 - T[264-301] 5.4E-6 - T[304-341] 1.3E-6 - T[344-381] 1.5E-6 - T[393-430] 9.5E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[148-439] 59.532 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[148-187] 9.239 - T[188-227] 15.822 - T[228-267] 9.339 - T[271-310] 13.449 - T[311-350] 14.017 - T[351-390] 13.148 - T[400-430] 9.573 |
| Pfam |
WD40_repeat (IPR001680) - T[153-178] 0.067 - T[183-218] 3.5E-6 - T[269-301] 6.1E-4 - T[307-341] 3.9E-5 - T[345-381] 4.3E-6 - T[396-430] 0.059 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[205-219] . - T[245-259] . - T[288-302] . - T[328-342] . - T[368-382] . - T[417-431] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[205-219] 2.2E-10 - T[328-342] 2.2E-10 - T[368-382] 2.2E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 31.01 % | 214 | 1.23E-62 |
| FBW1A_HUMAN | 81.208 % | 770 | 0 |
| FBW1B_HUMAN | 80.899 % | 762 | 0 |