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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...' > 
  2. Region 'REG00000160' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr10.g47093.01.t

Possible name(s)

NAF1

Gene model

Boschl.CG.Botznik2013.chr10.g47093

Location

chr10 [9,929,554 / 9,933,938]

Sequences

Amino acid sequence

Length: 346

>Boschl.CG.Botznik2013.chr10.g47093.01.p
MEDILANYGECDDYLSAEDELSGNNSPSGGDARECEPTTLASVEKTAETTKVSDPSTCSN
YQMEANVTSSSLSAEACDDLDSNCLMKANVTSSLSTEVYDDPEAVIDSETSYEQITIKDV
SEMETNMCSESISEITKEKDEVVKSNKEESGDSDSDCETSSSSTCESSDDSLDIEIRNRA
VDLVEEINALKSNEPKVKGEILPSELPPVEDLSIVLPQDTVLQAVGKITQVMKDNSIVIQ
SHPNNPALDFETVLFLSHRKAIGKVEETFGPVPNPYYIVRFNSEEHMNSNGVKLGEEVFY
APKLQDLTSYVFLSALRQLRGSDASWCNDVEPPPLVSIIPMTRKRR

Nucleotide sequence

Length: 1,041

>Boschl.CG.Botznik2013.chr10.g47093.01.t
TGGAAGACATTTTGGCAAATTATGGCGAGTGTGACGACTATCTATCTGCTGAAGATGAAC
TTTCCGGAAACAATTCGCCGAGTGGGGGTGACGCGAGAGAGTGCGAACCGACTACCCTCG
CGTCCGTGGAAAAAACTGCAGAGACGACGAAAGTATCCGATGCATCAACATGCTCGAATT
ATCAAATGGAGGCTAATGTGACATCGTCTTCTCTGTCTGCCGAAGCATGTGATGATCTAG
ACTCGAATTGTCTAATGAAAGCTAATGTGACATCGTCACTGTCAACCGAAGTATATGATG
ATCCGGAGGCTGTTATCGATTCCGAAACCTCGTATGAACAGATAACCATCAAAGATGTGT
CAGAAATGGAGACGAATATGTGCTCCGAAAGTATCTCTGAGATCACAAAAGAAAAAGATG
AAGTGGTAAAATCTAACAAAGAGGAGTCTGGGGACAGCGATTCAGACTGTGAGACCAGCA
GCAGCTCTACATGTGAATCCAGTGATGATTCGTTGGACATTGAAATCAGGAACAGAGCTG
TGGATTTGGTTGAAGAAATCAATGCGCTAAAGAGCAACGAACCGAAAGTAAAAGGGGAAA
TACTGCCATCTGAATTGCCGCCAGTGGAAGATCTGAGTATAGTCCTACCGCAAGACACCG
TCCTTCAAGCTGTTGGCAAGATCACACAAGTCATGAAAGACAATTCTAGTGTAATCCAGT
CTCATCCGAACAATCCTGCACTTGATTTTGAAACTGTTCTGTTTTTATCGCACAGAAAAG
CAATCGGAAAGGTCGAAGAGACGTTCGGTCCCGTGCCCAATCCGTACTACATCGTGAGAT
TCAACAGCGAGGAGCATATGAATTCGAATGGCGTTAAGCTCGGAGAAGAAGTATTTTACG
CCCCCAAGTTGCAGGACTTGACAAGTTATGTATTTCTCTCGGCGCTAAGACAGCTTCGTG
GATCTGATGCGTCGTGGTGTAACGATGTTGAGCCTCCGCCTCTTGTGTCGATTATTCCGA
TGACGAGGAAGAGAAGATAGC

InterProScan

Pfam
H/ACA_rnp_Gar1/Naf1 (IPR007504) - T[205-334] 3.5E-33
Gene3D
Gar1/Naf1_Cbf5-bd_sf (IPR038664) - T[214-301] 1.5E-27
SUPERFAMILY
Transl_B-barrel_sf (IPR009000) - T[223-300] 1.52E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NAF1_HUMAN 43.114 % 147 2.36E-40