- Transcript 'KH2012:KH.C4.285.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g62108.01.t
Possible name(s)
SMAD2; SMAD3; SMAD5
Gene model
Location
chr10 [4,313,344 / 4,315,525]
Amino acid sequence
Length: 223
>Boschl.CG.Botznik2013.chr10.g62108.01.p
MSRSSGSTTQSNHGGNDEVHPVAYQEPPYWCSISYYELNQRIGETFHASQSSLTIDGFTD
PSNSERFCLGLLSNINRTHHIEMTRRHVGKGVRLYYIAGEVFAECLSDSAIFVQSPNCNR
RYGWHPATVVKIPPGCHLKIFNNQEFAALLSQSVNQGFEAVYQLTRMCTIRMSFVKGWGA
EYRRQHVTSTPCWVEIHLNGPLHWLDKVLQQMGAPQLPCSSIS
Nucleotide sequence
Length: 672
>Boschl.CG.Botznik2013.chr10.g62108.01.t
TGTCTCGTTCTTCAGGCTCCACGACCCAAAGCAACCACGGCGGCAATGACGAGGTCCACC
CCGTCGCCTACCAAGAGCCCCCCTACTGGTGCTCCATCTCCTACTACGAGTTGAACCAAC
GAATCGGCGAAACGTTCCACGCGTCTCAGTCGTCACTGACTATCGACGGTTTCACCGACC
CGTCCAATTCCGAGCGTTTCTGTCTCGGGCTGTTGAGCAACATCAACAGAACGCATCATA
TCGAGATGACGCGACGTCACGTCGGGAAAGGTGTCCGACTTTATTACATTGCCGGCGAGG
TTTTTGCCGAGTGCCTGAGCGACAGCGCCATATTCGTGCAATCGCCAAACTGTAACCGCA
GGTACGGTTGGCACCCGGCCACCGTCGTCAAGATACCGCCAGGCTGTCATCTCAAGATCT
TCAACAACCAGGAATTCGCAGCTTTGCTCTCGCAGTCCGTGAACCAAGGCTTTGAAGCGG
TCTACCAGCTGACGCGGATGTGCACCATCAGGATGAGCTTCGTCAAGGGCTGGGGGGCCG
AATACCGTCGTCAGCACGTCACGTCGACCCCTTGCTGGGTGGAGATTCATCTGAACGGAC
CATTGCATTGGTTGGACAAAGTCTTGCAGCAGATGGGCGCTCCGCAACTGCCTTGTTCCA
GTATCTCTTAAA
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[4-213] 1.74E-92 |
| PANTHER |
Dwarfin (IPR013790) - T[11-223] 2.5E-137 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[21-223] 8.1E-97 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[28-199] 6.9E-101 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[29-199] 6.0E-79 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[30-223] 73.612 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD3_HUMAN | 83.173 % | 380 | 3.02E-133 |
| SMAD5_HUMAN | 73.913 % | 329 | 1.91E-112 |
| SMAD2_HUMAN | 83.981 % | 382 | 2.35E-133 |