- Transcript 'KH2012:KH.C2.821.v1....' >
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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g63542.01.t
Possible name(s)
HERC4; RCBTB1; RCBTB2
Gene model
Location
chr10 [3,778,920 / 3,790,526]
Amino acid sequence
Length: 338
>Boschl.CG.Botznik2013.chr10.g63542.01.p
MMDSCSPPADIEPVADRNKSSTRHDIVKYRFQTSDLALWPILNLVEAEIRSKIRLVFVFS
QAAAEVIFTTNDDKVYALGTNTNGCLGVGDTVSSLKPRTISALDGKKIIDIAAGHGPHVV
ALTEDGVVYTWGQNVYSQLGNGTSAPCLTPTPRSINHRVIKIACGNHHSLVLTDTGEVFA
WGYNNCGQTSSLAVTDNGEVYSWGYNGNGQLGVGNNVNQSNPCRIAALQNVVVVQIVCGF
AHSLALSDDGTLYGWGANSYGQLGCGNKANAVTPIQVAVELGRVVLVAASPYSHSSAAQN
QLGQVFMWGQLRMQSTVVPALTDFSTLDQVFVGFSAPP
Nucleotide sequence
Length: 1,014
>Boschl.CG.Botznik2013.chr10.g63542.01.t
TATGATGGACTCTTGCAGCCCCCCTGCTGACATTGAGCCTGTAGCCGACCGTAATAAGTC
GTCCACACGACATGACATTGTCAAGTACAGATTTCAAACTTCAGATCTAGCTCTCTGGCC
GATTCTGAACCTTGTAGAGGCCGAAATTAGATCGAAGATTCGTCTTGTTTTTGTCTTCAG
TCAAGCGGCGGCCGAAGTTATCTTTACAACCAATGATGACAAGGTGTATGCGTTGGGAAC
AAACACGAATGGATGTTTAGGAGTTGGTGATACTGTGAGCTCCCTTAAGCCTCGAACCAT
CAGTGCTCTTGATGGCAAAAAGATAATTGATATTGCAGCAGGACACGGACCTCACGTGGT
CGCTTTGACAGAAGATGGTGTCGTCTACACCTGGGGTCAAAATGTGTATTCGCAGCTGGG
CAACGGCACGAGTGCTCCTTGCCTCACTCCCACTCCCAGAAGTATCAATCACAGAGTCAT
CAAGATCGCGTGCGGAAATCACCATTCTCTTGTCCTGACCGATACTGGGGAGGTTTTTGC
TTGGGGCTACAACAATTGCGGACAGACATCGTCTCTGGCTGTGACTGATAACGGCGAAGT
ATATTCGTGGGGCTACAACGGAAACGGTCAATTGGGAGTGGGAAATAACGTGAACCAGTC
CAACCCATGCAGAATTGCTGCTTTACAGAATGTTGTCGTTGTCCAGATTGTGTGCGGATT
TGCACACAGTTTAGCTCTGTCCGACGATGGAACGTTGTACGGCTGGGGCGCGAACAGTTA
CGGTCAGCTGGGTTGCGGAAACAAGGCGAATGCGGTTACACCCATCCAGGTAGCGGTTGA
GCTCGGACGCGTTGTTCTTGTTGCTGCTTCACCGTACTCTCATTCTTCCGCAGCCCAGAA
TCAGCTTGGACAGGTTTTTATGTGGGGTCAACTTCGCATGCAATCCACTGTCGTTCCAGC
GCTGACAGACTTCTCGACATTGGACCAAGTATTCGTTGGATTTAGTGCGCCACC
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[58-188] 1.2E-41 - T[189-330] 6.2E-38 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[67-189] 1.31E-38 - T[186-323] 3.92E-36 |
| Pfam |
Reg_chr_condens (IPR000408) - T[72-116] 1.1E-9 - T[125-172] 9.3E-14 - T[197-246] 6.4E-14 - T[249-290] 4.0E-9 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[73-125] 11.248 - T[126-175] 15.268 - T[198-249] 17.8 - T[250-301] 11.208 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[74-90] 9.1E-13 - T[109-122] 9.1E-13 - T[128-144] 9.1E-13 - T[198-214] 9.1E-13 - T[236-252] 9.1E-13 - T[252-266] 9.1E-13 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[162-172] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC4_HUMAN | 30.576 % | 134 | 6.89E-35 |
| RCBT2_HUMAN | 49.112 % | 333 | 6.83E-111 |
| RCBT1_HUMAN | 49.555 % | 333 | 2.14E-111 |