Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr11.g56052.01.t

Possible name(s)

SLC26A2; SLC26A4; SLC26A5

Gene model

Boschl.CG.Botznik2013.chr11.g56052

Location

chr11 [1,021,277 / 1,023,846]

Sequences

Amino acid sequence

Length: 198

>Boschl.CG.Botznik2013.chr11.g56052.01.p
MQESDHRYKVDRPTQSDQEIQEKLGLEDDGESTLLLGARRKIANAXSCSKSSCMKWIAGV
FPILSWLRSYEKFWIAGDLVAGLTVGVVHIPQSLAFSILAGLAPVFGLYTSFYPVLLYTL
MGTSRHISVGTFAVTSLMTQSVVFRHYPPDLDQVSTNATVNATTPSPLGALASLTELDLK
RAGVAAALTFIMGLFQVC

Nucleotide sequence

Length: 597

>Boschl.CG.Botznik2013.chr11.g56052.01.t
CATGCAAGAAAGCGATCATAGATACAAAGTCGACCGGCCCACGCAGTCCGACCAAGAGAT
ACAAGAAAAGCTAGGGCTTGAAGATGATGGCGAAAGCACTTTGCTTCTAGGCGCCAGGCG
AAAGATCGCTAACGCGNGTTCCTGTTCCAAGTCCTCATGTATGAAATGGATAGCCGGTGT
GTTTCCTATACTCTCTTGGCTGAGATCGTACGAAAAGTTTTGGATTGCGGGAGATCTGGT
GGCAGGTTTGACTGTCGGAGTGGTTCACATCCCACAAGGTCTTGCTTTTTCTATTCTCGC
CGGCTTGGCTCCAGTATTCGGACTCTACACGTCGTTTTATCCCGTCCTGCTCTATACTCT
GATGGGCACATCCCGCCACATATCCGTTGGCACGTTTGCGGTCACGAGTCTAATGACGCA
GTCGGTTGTGTTTCGGCATTACCCGCCTGACCTGGACCAGGTGTCGACAAACGCCACAGT
GAATGCTACGACGCCATCACCGCTTGGAGCACTTGCTTCTCTGACAGAGCTCGACTTGAA
GCGAGCGGGAGTTGCTGCAGCTTTGACGTTTATAATGGGACTATTTCAGGTATGTTG

InterProScan

PANTHER	SLC26A/SulP_fam (IPR001902) - T[7-198] 3.1E-50
Pfam	SLC26A/SulP_dom (IPR011547) - T[76-197] 5.3E-27
ProSitePatterns	S04_transporter_CS (IPR018045) - T[104-125] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
S26A5_HUMAN	39.691 %	134	9.38E-37
S26A4_HUMAN	35.176 %	111	1.68E-28
S26A2_HUMAN	34.975 %	114	1.72E-29