- Transcript 'Haaura.CG.MTP2014.S6...' >
- Region 'REG00000160' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g01011.01.t
Possible name(s)
EFHC1; EFHC2
Gene model
Location
chr12 [11,177,752 / 11,188,082]
Amino acid sequence
Length: 518
>Boschl.CG.Botznik2013.chr12.g01011.01.p
MGKIDMSFFESTATNLFTKLRKIANLLRFPNRAITCFVSIRRLVKYSLRLRIYIKPFPTS
NCQVLKFRAYFKETVHESSQEFYRVRPVDIYYYLEDDSISVVEPLVQNSGIPQGKLIKRQ
RLPKNDQGDNWHWKDLNLAMNVTFYGKVFRLTSCDKFTAEFLESEGLILNGPESVPVDPY
TKSRNQPLRSYVTPSDFDKLNKFLKLDRKVLRFYCVWDDRDAMFGEMRPFVLHYFLVDDT
VEIREVHEPNDGRDPFPVLLRRQRLPVDRNNVDSSFPMVVLELSDHEVKSWFTASDFAIG
RTLFISGRRFLIYDCDKFTQEFYRRNFGISDFTPVPVKGKAKEVPKMELPPYNGFGSLED
STQNCLSLVPQPPKKDFIKMLENDHKILRYEARLDSMRPEDKGRRFIISYRLSDDMISIF
EPPQRNSGIIGGKFLEATRITKPNSDVDKPEFYGPGDLAIGTVIQIFKHRFVITNCDEYV
LNMLEAYADHYPASTIDSIREKHGKSTPFKPTDQDKQN
Nucleotide sequence
Length: 1,557
>Boschl.CG.Botznik2013.chr12.g01011.01.t
TGGGTAAAATAGACATGAGCTTCTTTGAATCCACAGCGACGAATTTGTTTACAAAGCTAC
GAAAAATTGCTAACCTACTACGGTTTCCTAATCGTGCGATCACGTGTTTCGTATCTATCC
GTAGGTTAGTTAAATATAGTTTAAGATTGAGAATATATATCAAGCCATTTCCAACTTCAA
ACTGCCAGGTTCTCAAGTTCCGAGCGTACTTCAAGGAGACGGTACACGAGAGCTCGCAGG
AATTCTACAGAGTGCGACCCGTCGACATCTACTATTACCTGGAAGATGACAGCATTTCAG
TGGTTGAGCCACTCGTACAGAATTCCGGGATTCCGCAGGGCAAACTGATCAAACGTCAGC
GTCTTCCGAAGAACGACCAGGGCGACAACTGGCATTGGAAAGACCTCAATCTCGCGATGA
ACGTTACCTTCTACGGGAAAGTGTTTCGCCTGACCAGCTGTGACAAGTTTACCGCGGAAT
TCCTGGAAAGCGAAGGCCTGATCTTGAACGGGCCAGAAAGCGTTCCTGTCGATCCGTATA
CAAAGTCTCGTAATCAACCTCTCAGATCCTACGTCACTCCATCCGACTTTGATAAACTCA
ACAAGTTCCTCAAGCTTGACAGAAAGGTTCTTCGTTTCTACTGCGTGTGGGACGATCGCG
ACGCCATGTTCGGAGAGATGCGACCATTCGTGCTTCACTACTTCTTGGTCGACGACACTG
TTGAGATTCGAGAGGTTCACGAACCCAACGACGGCCGCGACCCGTTTCCTGTTTTATTGA
GGAGGCAGAGACTTCCCGTGGACAGAAACAACGTTGACTGTTCTTTCCCGATGGTGGTGT
TGGAATTGTCGGACCACGAAGTGAAAAGCTGGTTCACGGCGTCTGACTTTGCAATTGGAC
GGACGCTCTTCATCAGCGGCAGAAGATTTCTCATCTACGATTGCGACAAGTTCACGCAGG
AGTTTTATCGAAGAAATTTTGGCATCTCCGATTTCACTCCGGTCCCGGTGAAAGGAAAAG
CAAAGGAGGTCCCGAAAATGGAATTGCCTCCCTACAACGGCTTCGGTTCGCTGGAGGATT
CGACCCAGAATTGCCTCAGCCTGGTGCCTCAACCGCCCAAGAAAGATTTCATCAAAATGC
TGGAGAACGATCACAAGATCTTGAGATACGAAGCCAGACTGGATTCAATGAGGCCCGAGG
ACAAGGGACGTCGCTTCATCATCTCCTATCGCCTCTCTGACGACATGATTAGCATTTTCG
AGCCTCCTCAACGCAACTCTGGAATCATCGGCGGCAAGTTCCTGGAGGCGACGCGCATCA
CGAAACCAAACTCGGACGTCGACAAGCCTGAATTCTACGGCCCCGGAGATTTGGCCATCG
GGACCGTCATTCAAAGTTTCAAACATCGGTTTGTGATCACGAATTGCGACGAGTATGTCC
TCAATATGTTGGAGGCGTACGCGGACCACTACCCGGCATCCACCATCGACAGCATTCGAG
AGAAGCACGGAAAATCGACACCGTTCAAGCCCACCGATCAGGATAAACAGAATTAAA
| Pfam |
DUF1126 (IPR010554) - T[57-158] 6.2E-29 - T[201-319] 4.6E-35 - T[378-479] 6.4E-32 |
| ProSiteProfiles |
Uncharacterised_DM10 (IPR006602) - T[61-166] 31.643 - T[207-327] 35.964 - T[384-488] 32.959 |
| SMART |
Uncharacterised_DM10 (IPR006602) - T[61-166] 4.1E-43 - T[207-327] 1.9E-42 - T[384-488] 8.6E-37 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EFHC1_HUMAN | 58.333 % | 560 | 0 |
| EFHC2_HUMAN | 38.697 % | 328 | 3.49E-104 |