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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr12.g14399.01.t

Possible name(s)

MAP1LC3A; MAP1LC3B; MAP1LC3B2

Gene model

Boschl.CG.Botznik2013.chr12.g14399

Location

chr12 [13,891,971 / 13,894,052]

Sequences

Amino acid sequence

Length: 119

>Boschl.CG.Botznik2013.chr12.g14399.01.p
MMERTFKQRRAFEERMNDVVQIRKQHPNKIPVIIEKYHREKSLPVLDKTKFLVPDHVTMS
ELVRIIRRRLHLSPSQAFFLLVNQRSMVSVASSVCEVYAHEKDEDGFLYMTYASQETFG

Nucleotide sequence

Length: 360

>Boschl.CG.Botznik2013.chr12.g14399.01.t
AATGATGGAAAGAACCTTTAAACAAAGAAGAGCCTTTGAGGAACGCATGAATGATGTCGT
GCAGATAAGGAAGCAGCATCCAAACAAAATCCCGGTCATCATTGAAAAATATCACCGCGA
AAAGAGTTTGCCTGTACTGGACAAGACCAAGTTTCTTGTGCCCGATCACGTGACTATGAG
TGAACTGGTCCGAATCATCAGGAGAAGACTGCATCTCAGCCCTAGCCAAGCGTTCTTCCT
CCTGGTTAATCAGAGGAGTATGGTTAGCGTGGCTTCTTCAGTTTGTGAAGTCTATGCCCA
CGAAAAAGACGAAGACGGATTTTTGTACATGACTTACGCGTCGCAAGAAACCTTTGGATA

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[2-119] 4.13E-41
PANTHER
Atg8-like (IPR004241) - T[3-119] 2.4E-60
CDD
Atg8-like (IPR004241) - T[6-119] 6.52206E-56
Pfam
Atg8-like (IPR004241) - T[14-119] 4.1E-42

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MLP3B_HUMAN 74.359 % 183 2.55E-61
MLP3A_HUMAN 73.504 % 184 1.01E-61
MP3B2_HUMAN 73.504 % 179 7.31E-60