- Transcript 'KH2012:KH.C1.836.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S47...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g42396.01.t
Possible name(s)
UBR1; UBR2; UBR3
Gene model
Location
chr12 [9,223,021 / 9,227,935]
Amino acid sequence
Length: 1,637
>Boschl.CG.Botznik2013.chr12.g42396.01.p
MDPTCVLCHTCFWKSEHSKHRYRMNASGGGGCCDCGDSEAWHNFPACSSHKSDANDSESE
EKELNLPNDIQSKAPYFFEAILKYVVEHITETKTNLTDLPSSLRPTIDIKSFSTVLFNDE
SHTFDFVIHVLRDALKCTESEAADFATVVDREGRSIICIGDEGKCENAKRIVTSRPTSLL
LFRTSDPLKTVVMHITNLAHQELAVQLLPALSDMVMRSEGLREIFCSVAMSQNISRQSEN
NVQYSSAIELLMRCDHELWKTPRNHYLQVIMNSILLNADAKKSFAVLFTKLYGAIQDGFL
KGDHDHSQSVAVLSVQLYTVPSISRYLIERENVIGRILHSLTKTFYVEPDAGLDPDWCRA
IKIDRKKMRHTIRRMAYTFHDLRYIFAVIPTDWTPALKSEFLNGLKYVLQLLLSIHGLDQ
TVRRTDAHIEHEPDWETSITLMMRIYPIIKRSLKWISSDTGLLFDALHFCLMCLKNLQDS
ENAGIQKISHGGQQYQCIDYDISSRAVSSHYPIPRLIVAILVELSNKGFDWQEIKSNPSL
AGLMEHPLFGIRLQEYSLRSLSLNAQVVSGMWKRNGLSLVNQIVFYKDYRCRQEAYERDI
QMMQFCASVVDPDHFLVNLQYKMNFLNHGCSQDQYAKLTSEVFTILIAAVGERYIPGVSD
VTETACIERKIIHILAVETKPRSKIMKVLPENITDQVDLEPILRKVADFREPANANSIGK
YSLKADVLNEFCPYAYQYSFADEDKAQQTIIKRKSSQNSPTFFIPPKLPKFSKLFCKTPF
ILCSDTFISLMSGFLQKVVAGDNEMCHDKIVRRGLYLIAMAVVESKHHMQNETSKFDFLA
KCISGCEASILFLLQKLETMEAHASHKDFVAWMIAEIESMTNLKRGAREHGSSVDHPSYP
KTEVKAEGSGQNARKQRAQELRSKLLLQMKTMQQNFLSQNPDLLGEDLPTAEETVSIPQA
TQNRTCMDASAQEQAANQPEESHTCMLCQEDSASSDGAMVMAAFVQRSSVQRRGTYVERQ
ELNHPFLHISFPTGIHSSTCSHAMHYECFKQFRKSSSDSRLFRHRHHRGYSEPPDSEFVC
PLCSRLSNTVIPFMCRSIVHQKRSRSQDDQDRNISDMEVTDDESLTLNDWLKHVCCAEEQ
FFDSSSVVIPDDEKESSSYDPEDFMSVDGSPTSSNQSADKSENLRNSFDEFVYDILKESS
LDLQNNNMLSRQSALWLSAVTTLSCTENALRLENGSVLSKLQVRQSAALEGVLGSVYALK
NTHAQNDDTFEKLFNCIDGDASLPALLNCNVFSVFCYLWFSADEKKDGAGLTGVISFERK
ILRLCSLAQLVQIFVRMKVADLELTCDNVGSSSAVENLVENCNSVRSIAGLNQLSDNVSR
VGFSKLVKTCMLPFLRCCTLFLRHLTGVAPCVDAADEAIDEFACVMKYLDLPENLSSILD
FDDGLQVVRRWLSHPNLQPSLSSGDILSYPNLSRIPDLVPLPYNYGELVGAAAAFKCPKF
ASDDSLHPTMCLVCGDVLCSQSYCCQQTHPDKDEKRLVGACTYHAMTCGAGRGLFLRVRE
CTVVLLDKHYXGTFITAXYLDGHGETDKGLRRXDPLYLDNSRLCALRKMWLTHGIPERVC
YDTELKNIRYMLDWAHL
Nucleotide sequence
Length: 4,914
>Boschl.CG.Botznik2013.chr12.g42396.01.t
CATGGATCCCACCTGTGTGCTGTGTCATACATGCTTTTGGAAAAGTGAACACAGCAAGCA
CAGATACCGCATGAATGCCTCCGGTGGAGGTGGTTGCTGTGACTGCGGCGACAGTGAAGC
GTGGCACAATTTTCCTGCTTGTTCCAGTCATAAATCCGATGCAAACGACAGTGAATCGGA
AGAAAAGGAGTTGAACTTGCCGAACGATATTCAATCGAAGGCGCCGTATTTTTTTGAAGC
AATATTGAAGTATGTGGTTGAGCATATAACAGAAACAAAAACCAACCTGACAGATCTGCC
AAGCTCGCTGCGTCCAACTATTGACATCAAATCCTTTTCAACCGTTTTGTTCAATGACGA
ATCTCACACTTTTGATTTCGTTATTCACGTTCTGAGAGACGCGCTCAAATGCACCGAATC
GGAGGCCGCAGATTTTGCGACTGTGGTTGACAGGGAAGGCCGTTCCATTATTTGTATTGG
TGATGAAGGAAAGTGTGAGAACGCGAAAAGAATTGTGACAAGTCGACCGACGTCTTTGTT
ACTGTTTCGGACGTCGGACCCTCTGAAAACCGTGGTTATGCACATCACAAATTTGGCCCA
CCAGGAATTGGCGGTTCAGTTACTACCCGCACTGTCTGATATGGTGATGCGGTCCGAGGG
CCTCCGTGAGATATTCTGTTCGGTTGCGATGAGTCAGAACATATCCCGGCAGAGTGAAAA
CAACGTCCAGTATTCAAGTGCGATCGAACTACTGATGAGATGCGACCACGAACTTTGGAA
GACTCCACGCAATCACTACCTTCAGGTAATCATGAACAGCATACTGTTGAATGCGGATGC
AAAAAAATCGTTCGCGGTACTATTCACCAAGTTGTACGGCGCAATACAGGACGGGTTCTT
GAAAGGCGATCACGACCATTCTCAGTCTGTGGCGGTGTTATCCGTTCAGCTGTACACGGT
CCCGTCGATTTCAAGGTATCTCATCGAACGTGAAAATGTGATCGGCCGAATCCTACATTC
CCTAACGAAAACGTTTTATGTAGAGCCCGACGCCGGTTTGGATCCTGACTGGTGTCGAGC
GATCAAAATTGATCGAAAAAAGATGCGGCATACGATTCGCAGAATGGCATATACCTTCCA
CGATCTTCGGTACATATTTGCGGTGATTCCAACGGACTGGACCCCTGCTTTGAAAAGCGA
ATTTTTAAACGGGTTGAAGTACGTTCTGCAATTGCTTCTGTCTATCCACGGATTGGATCA
GACGGTCCGAAGGACAGACGCGCACATTGAACATGAACCAGACTGGGAGACGAGTATCAC
TTTAATGATGAGAATTTATCCCATCATCAAGCGCTCGCTAAAATGGATATCCAGCGATAC
GGGATTGCTTTTTGATGCGCTTCACTTCTGCCTCATGTGTCTGAAAAACTTGCAAGATTC
TGAAAACGCAGGAATTCAGAAAATATCACACGGCGGCCAGCAATATCAATGCATCGATTA
TGACATAAGTTCGAGAGCGGTGTCGTCTCATTATCCGATTCCACGCTTGATTGTAGCAAT
CCTTGTTGAACTCAGTAACAAAGGTTTCGATTGGCAAGAGATCAAATCGAACCCGTCGCT
GGCAGGTCTGATGGAACATCCTCTCTTCGGGATTCGACTGCAAGAATACAGTCTACGGAG
TCTCAGTCTGAATGCTCAGGTGGTCAGCGGAATGTGGAAACGCAACGGTCTATCTTTGGT
CAATCAGATCGTGTTCTACAAGGACTACAGGTGCAGACAGGAAGCGTATGAACGGGATAT
TCAAATGATGCAGTTCTGCGCATCAGTTGTGGACCCTGACCATTTTCTAGTGAACTTGCA
GTACAAGATGAATTTTCTGAACCACGGATGCTCGCAAGACCAATACGCCAAGTTGACTAG
TGAGGTATTCACTATTCTGATCGCAGCCGTCGGCGAAAGATACATACCCGGTGTGTCCGA
CGTTACCGAAACTGCATGTATCGAAAGGAAAATTATCCACATTCTAGCTGTTGAGACAAA
GCCGAGGTCGAAAATCATGAAGGTGCTACCAGAGAATATAACCGACCAAGTCGATTTGGA
ACCGATACTGCGCAAAGTCGCAGATTTTCGCGAACCGGCAAACGCCAATTCTATCGGGAA
GTATTCGTTAAAAGCAGATGTCCTGAACGAATTTTGCCCGTACGCATATCAATACAGCTT
TGCCGACGAGGACAAAGCACAGCAGACTATAATCAAACGAAAATCTTCACAAAACTCCCC
GACGTTTTTTATTCCGCCGAAATTGCCCAAGTTTTCAAAGTTATTCTGTAAGACCCCGTT
TATTTTGTGTTCCGACACCTTCATCTCTCTCATGTCCGGATTTCTTCAGAAAGTGGTCGC
CGGCGATAACGAAATGTGTCACGACAAGATTGTCCGCAGAGGGTTGTACCTGATTGCGAT
GGCCGTTGTCGAAAGTAAACACCACATGCAGAACGAGACGTCGAAGTTTGATTTCTTGGC
GAAATGCATATCGGGCTGCGAGGCAAGCATTCTGTTCCTTTTGCAAAAGCTTGAGACGAT
GGAAGCGCACGCTTCTCACAAAGATTTCGTCGCGTGGATGATTGCGGAAATCGAGAGTAT
GACTAATTTGAAGAGAGGGGCACGCGAGCACGGATCGTCAGTCGATCATCCGTCGTATCC
CAAGACGGAAGTGAAGGCCGAAGGTTCCGGTCAAAACGCACGCAAGCAAAGAGCACAGGA
GCTGCGTTCCAAGTTGCTTTTGCAAATGAAAACGATGCAACAAAACTTTTTGTCACAAAA
TCCGGACTTGCTGGGAGAAGACTTGCCGACGGCAGAAGAGACCGTGTCCATACCTCAAGC
GACGCAGAACCGTACGTGCATGGACGCTTCGGCACAGGAGCAAGCGGCCAATCAGCCGGA
AGAGTCCCACACATGCATGCTTTGCCAAGAGGATTCTGCGTCATCAGACGGCGCAATGGT
CATGGCGGCGTTTGTCCAAAGATCAAGCGTCCAACGCAGGGGTACTTACGTTGAACGGCA
AGAGTTGAATCATCCGTTTCTTCACATTAGTTTTCCTACTGGGATACACAGCAGCACTTG
CAGCCACGCGATGCATTACGAGTGCTTCAAGCAATTTCGTAAATCGTCGAGCGACTCGAG
GCTGTTCCGCCACAGGCACCACCGCGGCTATAGCGAGCCGCCTGACAGCGAATTTGTATG
TCCTCTCTGTAGTCGACTTAGCAACACTGTGATACCGTTTATGTGCCGAAGTATCGTTCA
CCAGAAAAGGAGTCGATCGCAAGATGACCAGGACAGGAATATTTCAGACATGGAAGTCAC
CGATGACGAATCGCTCACTCTAAATGATTGGTTGAAGCACGTGTGCTGTGCTGAAGAACA
ATTTTTCGATAGTTCTTCGGTAGTTATACCAGATGACGAGAAAGAATCGAGTTCTTACGA
TCCAGAAGACTTTATGTCGGTTGACGGATCGCCGACTTCGAGCAATCAATCTGCCGATAA
ATCTGAGAATTTGAGAAACAGTTTCGATGAGTTCGTTTATGACATACTAAAGGAGTCGTC
GCTTGATCTTCAGAACAACAACATGCTGTCTAGGCAATCGGCATTATGGCTGTCGGCAGT
GACAACGTTATCGTGTACGGAAAACGCCCTGAGACTCGAAAACGGATCGGTCCTGTCAAA
GCTTCAGGTGAGGCAATCCGCCGCACTGGAAGGCGTATTGGGTTCGGTGTACGCGCTGAA
AAATACACACGCCCAAAACGACGACACTTTCGAAAAGCTGTTCAACTGCATCGACGGGGA
CGCGTCGCTACCGGCTCTGTTGAACTGCAACGTTTTTAGCGTGTTCTGTTACCTCTGGTT
CAGCGCGGACGAGAAGAAAGATGGTGCCGGATTGACGGGTGTAATTTCCTTCGAAAGAAA
AATTTTACGGCTCTGCTCGCTTGCCCAACTCGTGCAGATTTTTGTCCGGATGAAAGTCGC
CGACCTGGAATTGACCTGCGACAACGTGGGCAGTTCCAGCGCGGTGGAAAATCTGGTCGA
AAATTGCAATTCAGTACGTTCGATAGCGGGATTGAACCAACTCTCTGACAACGTGTCACG
CGTTGGCTTTTCAAAACTTGTGAAGACCTGCATGCTGCCTTTTCTTCGGTGTTGCACTTT
GTTCCTGAGGCATCTAACGGGAGTTGCCCCCTGTGTAGACGCTGCTGACGAAGCGATTGA
CGAATTCGCTTGCGTGATGAAATATTTGGATTTGCCGGAAAATCTGTCATCCATACTGGA
CTTTGACGATGGCCTGCAGGTTGTTAGAAGATGGTTGAGCCACCCGAATTTACAGCCATC
ACTCTCGTCAGGCGACATATTATCTTACCCGAATTTATCAAGAATACCCGACCTGGTGCC
ATTGCCGTACAACTACGGCGAGCTGGTTGGTGCAGCCGCCGCTTTCAAATGTCCGAAATT
CGCATCGGACGACTCTCTCCACCCCACGATGTGTCTGGTTTGCGGCGACGTGCTGTGCTC
GCAGAGTTACTGCTGCCAACAGACGCACCCCGACAAAGACGAGAAACGCCTGGTTGGGGC
CTGCACTTACCATGCGATGACATGCGGCGCCGGTCGGGGCTTGTTTCTGCGCGTCCGAGA
ATGTACGGTCGTGTTGCTCGATAAGCACTACCGNGGAACTTTCATAACGGCCCCNTACCT
GGACGGGCACGGGGAAACGGATAAGGGACTGCGTCGTGGNGACCCTCTTTATTTGGACAA
TTCCAGGCTGTGCGCGCTCCGTAAGATGTGGCTCACTCACGGTATTCCGGAGAGGGTGTG
TTATGATACGGAATTGAAAAATATTAGATACATGCTCGATTGGGCTCATCTATG
| SMART |
Znf_UBR (IPR003126) - T[1-51] 9.5E-4 |
| ProSiteProfiles |
Znf_UBR (IPR003126) - T[1-52] 7.99 |
| Pfam |
Znf_UBR (IPR003126) - T[2-50] 2.9E-10 |
| Gene3D |
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[94-181] 1.7E-6 |
| Pfam |
ClpS_core (IPR003769) - T[110-175] 1.2E-17 |
| SUPERFAMILY |
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[110-174] 8.37E-12 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[667-750] 1.88E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBR3_HUMAN | 27.5 % | 88.6 | 2.51E-17 |
| UBR1_HUMAN | 29.536 % | 684 | 0 |
| UBR2_HUMAN | 32.155 % | 756 | 0 |