Aniseed - Transcript Card

Clone 'cilv040m05' >
Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr12.g60999.01.t

Possible name(s)

C3; CD109; CPAMD8

Gene model

Boschl.CG.Botznik2013.chr12.g60999

Location

chr12 [4,172,773 / 4,178,374]

Sequences

Amino acid sequence

Length: 389

>Boschl.CG.Botznik2013.chr12.g60999.01.p
MLSMGPNVYAHKYMSSVGKMLPGSAEEKGSIEKMKSGFANELRYRCNCNPKVWSVFPRAA
PSVWLNAYVNKVFAQAKQFHTTMDTSPICTSVSWLTTQQAGDGSFNTGGRVIHQEMHGAV
GSKLTLTAYVMMSLVESVSLCDQHVKAAEEAIFKATQYLVGQKENPQMEQPYAIALVAYA
MTVSDVMHEYSVELRAKLRSKIILSPDNRLAFLKGAPLAKVQGTGTHAYWYQRKPLAIDI
EATGYGLLALLFEAGATGPTQEMFDLTRKIVLWLIEQRDENGGFTTTQDTVVGLHALADY
MIWSSTAEPDQNEVDIDVTITSPEGTEYFDPPLRFLLDKSNENVTQPIPVGPNAIAKGIL
NVRTQGKLTALLIYCNAHRCDHGFAKSIT

Nucleotide sequence

Length: 1,170

>Boschl.CG.Botznik2013.chr12.g60999.01.t
TGTTGTCCATGGGACCGAACGTGTACGCGCACAAGTACATGTCTTCCGTCGGCAAAATGC
TGCCTGGGTCTGCCGAAGAGAAAGGGTCAATTGAAAAAATGAAGTCAGGCTTTGCTAACG
AGCTCCGGTACAGATGTAACTGCAACCCTAAAGTTTGGTCGGTCTTCCCTCGTGCAGCAC
CTAGCGTTTGGTTGAATGCGTACGTTAATAAAGTGTTTGCGCAAGCTAAACAATTCCACA
CTACCATGGACACATCACCGATTTGTACTTCTGTGTCCTGGCTGACAACGCAGCAAGCTG
GCGACGGTAGTTTCAATACTGGAGGACGCGTCATTCATCAAGAAATGCATGGCGCAGTTG
GAAGTAAACTGACTCTCACCGCGTACGTAATGATGTCCCTGGTGGAATCCGTCTCTTTGT
GCGACCAACACGTCAAAGCCGCGGAGGAAGCCATCTTCAAAGCAACTCAATACTTGGTCG
GTCAAAAAGAGAACCCTCAGATGGAGCAACCGTATGCCATCGCGCTCGTTGCCTACGCGA
TGACTGTGTCTGATGTCATGCATGAGTACAGTGTGGAATTGAGAGCCAAGTTGCGATCCA
AGATCATCTTATCTCCCGACAACAGACTGGCTTTCCTAAAAGGTGCACCTTTGGCTAAAG
TTCAAGGCACGGGCACCCACGCCTACTGGTATCAACGTAAACCACTCGCTATTGACATCG
AAGCCACTGGATATGGATTGCTGGCTCTTTTGTTCGAGGCAGGAGCGACTGGTCGCACTC
AGGAGATGTTCGACCTCACCAGGAAGATTGTCTTGTGGCTGATCGAACAAAGAGACGAGA
ACGGTGGTTTTACAACAACTCAAGACACGGTTGTTGGATTGCATGCCCTTGCAGATTACA
TGATATGGAGCAGCACTGCGGAACCGGACCAGAACGAAGTCGATATCGATGTAACGATCA
CATCACCGGAAGGCACTGAATACTTTGATCCTCCTCTGAGGTTCCTTCTAGACAAGTCCA
ATGAAAATGTGACTCAACCTATACCGGTCGGACCAAATGCAATTGCAAAGGGAATTTTGA
ACGTACGAACACAAGGTAAGCTTACCGCGTTATTGATTTATTGTAATGCGCACCGATGTG
ATCATGGCTTCGCAAAATCGATTACCTGAG

InterProScan

SUPERFAMILY	Terpenoid_cyclase/PrenylTrfase (IPR008930) - T[1-303] 2.27E-53
Pfam	A2M_comp (IPR011626) - T[37-301] 1.4E-60

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CPMD8_HUMAN	29.144 %	120	2.82E-29
PZP_HUMAN	28.664 %	103	1.22E-23
CO3_HUMAN	30 %	130	6.56E-33