- Clone 'mae40j22' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g62651.01.t
Possible name(s)
RPS11
Gene model
Location
chr12 [3,102,679 / 3,104,380]
Amino acid sequence
Length: 159
>Boschl.CG.Botznik2013.chr12.g62651.01.p
MADTAQTERAYQKQPTVFQNKKRALGVAAPKKQLRHVRSIGLGFKTPREAIDGNYIDKKC
PWTGNVKIRGRILTGIVRKMKMQRTIVIRRDYLHYIKKYNRYEKRHKNMSVHLSPCFRDV
NPGDIVTVGECRPLSKTVRFNVIKVTKAAGASKKQFGRF
Nucleotide sequence
Length: 480
>Boschl.CG.Botznik2013.chr12.g62651.01.t
CATGGCTGATACCGCGCAGACTGAGAGAGCTTATCAAAAGCAACCTACAGTATTTCAAAA
TAAGAAGCGAGCACTTGGAGTAGCTGCTCCCAAAAAGCAACTTCGTCATGTGAGATCCAT
AGGACTCGGTTTCAAAACTCCGCGTGAGGCCATTGATGGAAACTACATTGACAAGAAGTG
CCCGTGGACAGGCAACGTCAAGATTAGGGGTCGTATCCTGACCGGCATCGTTCGTAAAAT
GAAGATGCAGCGCACAATCGTGATCAGACGCGACTACTTGCATTACATCAAAAAATACAA
CCGTTACGAAAAGCGTCACAAGAACATGTCGGTTCATCTTTCGCCGTGTTTCAGGGACGT
CAATCCAGGAGACATTGTTACTGTTGGCGAGTGCAGACCTCTCAGCAAGACTGTCCGATT
CAATGTTATTAAGGTCACCAAAGCGGCTGGGGCTTCCAAAAAACAATTTGGAAGATTCTA
| PANTHER |
Ribosomal_S17/S11 (IPR000266) - T[1-157] 7.9E-76 |
| Pfam |
Ribosomal_S11_N (IPR032440) - T[6-73] 4.4E-32 |
| TIGRFAM |
Ribosomal_S17_arc-typ (IPR028333) - T[47-145] 1.6E-34 |
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[69-151] 4.28E-30 |
| ProDom |
Ribosomal_S17/S11 (IPR000266) - T[71-143] 4.0E-32 |
| Pfam |
Ribosomal_S17/S11 (IPR000266) - T[75-144] 9.9E-29 |
| PRINTS |
Ribosomal_S17/S11 (IPR000266) - T[89-112] 2.5E-13 - T[123-133] 2.5E-13 - T[133-140] 2.5E-13 |
| ProSitePatterns |
Ribosomal_S17_CS (IPR019979) - T[123-135] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS11_HUMAN | 79.375 % | 256 | 3.61E-89 |