- Transcript 'KH2012:KH.C11.459.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S62...' >
- Clone 'AHC0AAA207YE23' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g64909.01.t
Possible name(s)
CCT4; CCT7; HSPD1
Gene model
Location
chr12 [1,767,765 / 1,769,619]
Amino acid sequence
Length: 617
>Boschl.CG.Botznik2013.chr12.g64909.01.p
MWCLDSFFFSQPVKLIFLLNISRSNNYLYIIFISAYQKTPHTMHRVSNIVRKVVSHPSQN
LFFARSYAKTVTFGSAARDEMLEGVNKLADAVAVTMGPKGRNVVIEQSWGGPKVTKDGVT
VAKSIEFKDKLKNIGAKLVQDVASNTNDEAGDGTTTATVLARAIAKEGTDKIARGANPIE
VRRGIQKAVEAVTTKLKELSKPVTTPDEIAQVATISANGDKEIGDLISEAMKKVGRNGVI
TVKDGKTLSDELEVIEGMKFDRGYISPYFINTAKGQKVEYQDAYVLLSDKKISSIQTIVP
ALELANAQRKPLVIIAEDIEGEALTTLVVNRLKVGLQVVAVKAPGFGDNRKNTLKDMAIA
TGAIIFGDEAMDLKLEDVQAHDLGKIGEVVITKDDTLLLRGGGKQEDIDRRIAQIQEQLD
ETSSDYEREKLNERLAKLASGVAVVKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPG
GGIALLRCSPALDTVQVSNKDEQIGVDIIRKVLRIPTSTICSNAGMEGQLIAEKLLQEEG
DYGYDARDDRFCNMIEAGIIDPTKVVKQALVDASGVASLLTTAEVVVSEEPKEESAMPPM
GGGMGGMGGMGGMGGMM
Nucleotide sequence
Length: 1,854
>Boschl.CG.Botznik2013.chr12.g64909.01.t
AATGTGGTGTCTTGATTCGTTTTTTTTTTCACAACCAGTGAAACTTATTTTCTTGTTAAA
TATCAGCAGGTCCAATAACTATTTATACATAATTTTCATCTCTGCCTACCAGAAGACACC
ACACACTATGCACCGAGTATCGAATATCGTCCGAAAAGTTGTTTCTCATCCATCTCAAAA
CCTGTTCTTCGCCAGAAGCTATGCGAAGACAGTTACATTCGGCTCGGCGGCCAGAGATGA
GATGCTCGAGGGTGTCAACAAGCTTGCAGACGCGGTAGCAGTCACGATGGGACCGAAAGG
GCGCAATGTCGTTATCGAGCAGTCGTGGGGTGGTCCGAAAGTTACGAAAGACGGTGTGAC
AGTAGCAAAATCAATCGAATTCAAAGACAAATTGAAAAATATTGGTGCAAAGCTAGTGCA
GGACGTCGCGAGTAACACCAATGACGAGGCTGGCGATGGGACCACAACCGCCACCGTCCT
GGCGCGGGCCATTGCAAAAGAAGGAACCGACAAAATCGCAAGAGGCGCAAATCCAATCGA
AGTGAGAAGAGGAATACAGAAAGCTGTGGAAGCCGTCACTACAAAGTTGAAGGAATTGTC
CAAGCCAGTGACCACTCCTGACGAAATCGCTCAAGTCGCCACGATATCAGCAAACGGCGA
TAAAGAAATAGGCGATCTTATATCGGAAGCAATGAAAAAAGTAGGCCGCAACGGCGTGAT
CACCGTCAAAGACGGCAAAACCTTGAGCGACGAACTAGAGGTTATCGAAGGAATGAAATT
CGACCGAGGCTACATATCGCCATACTTCATCAACACCGCCAAAGGCCAGAAAGTTGAATA
TCAAGACGCGTACGTTCTTCTCAGTGATAAGAAAATTTCGTCGATTCAAACGATCGTGCC
GGCTTTGGAGCTCGCCAATGCCCAACGCAAGCCGCTCGTAATCATAGCGGAAGACATCGA
AGGCGAAGCACTCACGACGTTGGTGGTCAACCGACTGAAAGTGGGGCTGCAAGTAGTGGC
AGTCAAAGCACCGGGCTTTGGAGACAACCGTAAGAACACACTGAAAGATATGGCTATCGC
GACAGGAGCCATTATCTTTGGCGACGAGGCGATGGATCTGAAACTGGAGGACGTGCAAGC
TCACGATCTCGGCAAGATCGGCGAAGTCGTTATCACGAAAGATGACACACTACTTCTGAG
GGGTGGCGGCAAGCAAGAAGATATCGACCGAAGAATCGCGCAAATCCAGGAGCAGCTTGA
CGAAACTTCGAGCGATTATGAACGTGAAAAACTTAACGAGCGCCTCGCCAAACTTGCCAG
TGGTGTTGCCGTAGTCAAAGTCGGAGGCTCCAGCGAGGTGGAAGTGAATGAAAAGAAAGA
TCGTGTCACAGATGCTTTGAACGCCACCAGAGCTGCTGTTGAAGAAGGTATTGTCCCTGG
AGGCGGTATCGCGCTACTGCGTTGTTCTCCGGCACTAGACACAGTGCAGGTAAGCAACAA
AGATGAGCAAATTGGTGTTGACATCATCAGAAAAGTACTGAGGATTCCAACATCAACGAT
CTGCTCAAATGCCGGAATGGAAGGTCAGCTGATTGCGGAGAAGTTACTGCAAGAAGAGGG
CGATTACGGCTATGATGCGAGAGACGACAGGTTCTGTAATATGATCGAAGCAGGCATCAT
CGACCCCACAAAGGTTGTCAAACAAGCGCTGGTCGACGCGTCTGGTGTTGCTTCTCTCTT
GACTACGGCGGAAGTGGTGGTTTCGGAAGAGCCCAAGGAAGAGTCGGCCATGCCTCCCAT
GGGCGGCGGTATGGGAGGAATGGGTGGTATGGGCGGCATGGGTGGAATGATGTA
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[59-604] 1.4E-256 |
| Hamap |
Chaprnin_Cpn60 (IPR001844) - T[67-613] 36.347 |
| TIGRFAM |
Chaprnin_Cpn60 (IPR001844) - T[68-593] 1.4E-215 |
| CDD |
Chaprnin_Cpn60 (IPR001844) - T[69-589] 0.0 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[72-199] 1.67E-71 - T[472-587] 1.67E-71 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[73-201] 1.8E-232 - T[477-587] 1.8E-232 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[88-588] 7.0E-87 |
| PRINTS |
Chaprnin_Cpn60 (IPR001844) - T[92-118] 5.4E-68 - T[148-175] 5.4E-68 - T[333-356] 5.4E-68 - T[416-441] 5.4E-68 - T[464-485] 5.4E-68 |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[202-256] 1.8E-232 - T[440-476] 1.8E-232 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[202-270] 1.24E-26 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[250-442] 8.89E-74 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[257-439] 1.8E-232 |
| ProSitePatterns |
Chaperonin_Cpn60_CS (IPR018370) - T[471-482] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CH60_HUMAN | 72.172 % | 812 | 0 |