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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr12.g66168.01.t
Possible name(s)
SCN1A; SCN2A; SCN3A
Gene model
Location
chr12 [1,495,032 / 1,506,408]
Amino acid sequence
Length: 882
>Boschl.CG.Botznik2013.chr12.g66168.01.p
MRILKLAKSWPTLNKLLRIIGKTLGKLWHLTLVFLLVLFIFAVVGMQLLRDQYKNEYKDH
MPRWNFVDFQHAFMVVFRIQCGEWIENMFVCMNVASPGICIPLFILVLVIGNLVILNLFL
ALLLNSFSGDALQRTDAEINSLAEAWDRIVRWVRKGVRAVTRCDFVTNCCSKLRVQLCYG
KRKGVARNSRVEAEKPKKESSRHDATAFRDLDTEVTMLGSPVTSETHENNNHSMLLNEKV
KTPSKASSVPKARRNASNDPNSAPTEHESAQPDHISVPINHDTLLLPPSHNRRSDDLVSQ
YSDDTRSVSTYAATPRTRSRRAHTNRDDATHTPRGEVVRCRGCSRTFRTSKASRHRKRLK
KINDGFKPAIAFQNRPDDNSDDVSSTRTDEDSALHPPRTPFRSYANIEYTRSSARSRAKS
EEFKGHASKFSRQNSDVADSVNFLLVGEPAQNSKYGGADETETLLRNNSSRTDDSKQSSK
KEGFANGRRKSQGSQRSSRTSLSRKEARSRHESVTSLEEDAETASQEGKEDTTIQPCFPA
FGVENRDGLFWKTRQKFFNLAVHPYFEYIAFEDIHLDNNPPLKKALQILDKFFCAFFAIE
MLIKWMGFGIREYFTNAWCLLDFVIVFDRTINFQVVVDALVRAIPSIFHVFLVCVIVWLI
FSILGVNFFGGRFGRCIMANGTTGIIMPRRDADSVWNATESCGRVIRQPLREEDIISVLN
KTECEQCREIMGMGNDSIVRWHVPPVNFDNVGQGFLSLMQVATFKGWLEIMASAIDVMEV
DGQPKYEESIVYYLYFCIFIVFGAFFSLNLFIGVIIDNFNQQKVKCAGGEDGVFLTDEQK
RYYNAIKRMASKAPKQPVPRPNNWFSNKVKKQFAYSPESPLY
Nucleotide sequence
Length: 2,649
>Boschl.CG.Botznik2013.chr12.g66168.01.t
TGAGGATTTTGAAGCTCGCCAAATCCTGGCCGACTTTGAACAAGCTGCTGCGGATCATCG
GCAAAACCCTCGGCAAACTTTGGCATCTCACCCTTGTCTTTCTGCTCGTGCTGTTTATAT
TTGCTGTCGTCGGTATGCAGCTGCTTAGGGACCAATACAAGAATGAGTACAAGGACCACA
TGCCGCGATGGAACTTTGTAGATTTCCAGCATGCTTTCATGGTTGTGTTCCGTATCCAGT
GCGGAGAATGGATCGAGAATATGTTCGTATGCATGAACGTGGCGTCACCAGGCATATGCA
TACCGTTGTTTATCCTGGTTCTTGTTATCGGAAATCTGGTGGTTCTGAACCTGTTCTTGG
CGCTATTGCTGAATTCATTCAGCGGCGACGCCCTGCAAAGGACGGACGCTGAGATTAACA
GCCTGGCGGAAGCTTGGGACAGAATCGTACGCTGGGTCAGGAAAGGAGTTCGTGCTGTCA
CGCGGTGCGATGTCGTGACGAACTGCTGCAGCAAGCTACGCGTGCAGTTGTGTTACGGGA
AGCGCAAAGGAGTGGCGCGCAACAGCCGAGTCGAGGCGGAAAAACCAAAGAAGGAATCTT
CCCGCCACGACGCGACCGCGTTTAGAGACTTGGACACGGAAGTGACGATGCTCGGATCGC
CCGTGACTTCGGAGACGCATGAAAATAGCAACCACAGCATGCTCTTGAACGAAAAAGTAA
AGACACCTTCCAAAGCCAGCAGTGTTCCCAAAGCTCGCCGCAACGCTTCCAACGACCCCA
ACAGTGCTCCAACAGAACACGAAAGCGCTCAACCCGACCACATCAGCGTTCCCATCAACC
ATGACACTCTGTTACTACCTCCGAGTCATAACAGACGTTCGGATGACCTAGTATCACAGT
ACAGCGATGACACTCGGTCAGTGTCGACTTACGCTGCCACGCCGCGCACGCGCAGCCGCC
GCGCGCACACCAACCGTGATGATGCTACTCACACGCCACGCGGTGAAGTCGTTCGCTGCC
GCGGCTGCAGCCGTACCTTCCGGACTTCCAAAGCTTCCCGGCACCGTAAACGGCTTAAAA
AGATCAACGACGGCTTCAAGCCGGCCATCGCCTTTCAAAACCGTCCCGATGACAACAGTG
ATGACGTCAGCAGCACCCGTACGGACGAGGATTCAGCCTTACACCCGCCGCGCACTCCGT
TCCGTTCGTACGCTAACATCGAGTACACGCGGTCCTCCGCGCGCAGTCGAGCGAAAAGCG
AAGAGTTCAAAGGTCACGCGTCGAAGTTTTCCCGCCAAAACTCGGACGTGGCAGACTCTG
TTAATTTTCTGCTGGTGGGCGAGCCTGCGCAGAATTCGAAGTACGGGGGCGCGGATGAGA
CCGAAACACTGCTTCGAAATAATTCGAGTCGAACCGACGATTCGAAGCAGAGCAGCAAGA
AAGAAGGGTTCGCGAACGGGAGGAGGAAGGGCCAAGGCAGTCAGCGTTCGTCCCGGACCA
GCCTTTCGCGCAAGGAAGCTCGCAGCCGACACGAAAGTGTGACATCACTAGAGGAGGATG
CGGAAACGGCAAGTCAAGAAGGAAAAGAGGATACGACGATCCAGCCTTGTTTTCCGGCGT
TCGGCGTCGAAAACCGCGACGGGCTATTTTGGAAGACACGCCAGAAGTTCTTCAACCTGG
CCGTCCACCCTTACTTCGAATATATCGCCTTCGAAGACATCCATTTAGACAATAACCCGC
CGTTGAAGAAGGCGTTGCAGATCCTCGACAAGTTTTTCTGTGCATTTTTCGCGATCGAAA
TGCTGATCAAATGGATGGGGTTCGGCATTCGGGAATATTTCACCAACGCGTGGTGCTTGC
TGGACTTCGTTATTGTCTTTGACCGTACTATTAATTTCCAGGTGGTCGTCGACGCGTTGG
TCCGGGCTATCCCGTCTATCTTCCACGTGTTCCTCGTCTGCGTCATCGTGTGGTTAATAT
TCAGGATACTGGGAGTGAACTTCTTCGGGGGCCGGTTCGGCCGGTGCATCATGGCGAACG
GCACCACCGGGATCATCATGCCCCGGCGGGATGCGGACAGTGTCTGGAATGCCACCGAGT
CTTGCGGGCGGGTCATTCGGCAGCCCTTGCGAGAGGAGGACATTATCTCGGTGTTGAACA
AGACTGAATGCGAACAGTGCCGCGAAATGATGGGAATGGGAAACGACAGCATCGTCAGGT
GGCACGTCCCTCCCGTGAACTTCGACAACGTCGGGCAAGGCTTTCTATCTCTCATGCAGG
TGGCTACATTCAAAGGCTGGCTCGAGATCATGGCGAGCGCCATCGACGTGATGGAGGTAG
ACGGCCAGCCGAAGTACGAAGAGTCGATCGTCTACTACCTTTACTTCTGCATCTTCATCG
TGTTCGGGGCTTTCTTCTCGCTCAACCTCTTCATCGGAGTCATCATCGACAATTTCAACC
AGCAGAAAGTGAAATGCGCGGGGGGCGAGGACGGAGTGTTTCTCACGGATGAGCAAAAAC
GGTATTACAACGCCATAAAAAGGATGGCATCGAAAGCGCCGAAGCAACCAGTGCCGCGGC
CCAATAATTGGTTTTCGAATAAGGTGAAGAAGCAGTTCGCGTACAGTCCGGAATCACCTT
TGTATTAAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SCN1A_HUMAN | 44.355 % | 291 | 1.74E-82 |
| SCN2A_HUMAN | 37.844 % | 290 | 2.34E-82 |
| SCN3A_HUMAN | 37.603 % | 288 | 9.14E-82 |