- Transcript 'KH2012:KH.C11.291.v1...' >
- Transcript 'Cisavi.CG.ENS81.R107...' >
- Region 'REG00000202' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g00740.01.t
Possible name(s)
BMP4; LEFTY1; LEFTY2
Gene model
Location
chr13 [10,410,731 / 10,414,985]
Amino acid sequence
Length: 325
>Boschl.CG.Botznik2013.chr13.g00740.01.p
METIENMDRNLLDLKNAMLQHTGLHDVPSISPEERDNFQIPAHVKKQYEELRMQHEKRHR
IKRSSLANLFGSVHANPGIPGDIVYSDPYIENLQFEMDGRIPPGTVVTMAELRLFKKVAD
LEKLRWIGRRQGRRYRNLHPSVFLRNHPGRFMKPVRHARVSIYHNLFNPDGTVKSTLVDS
RKIHVNGSGWQAFDVTNAVHQWQLHPTRMMTMTLEMWIEGTRPTRHAANIAKLVRFTGQK
ERLRGQGYRPELVVFTREERASRVRECRPNPNPKRRKCCRDNHYVSFRDIEWTKFWILEP
AGYQAFRCDGKCSASRRNGFSRSCS
Nucleotide sequence
Length: 977
>Boschl.CG.Botznik2013.chr13.g00740.01.t
CATGGAAACCATTGAAAACATGGACAGGAATTTGTTGGATTTGAAGAATGCGATGCTGCA
GCATACTGGTTTACATGACGTACCTAGCATATCTCCAGAGGAACGTGACAACTTCCAAAT
CCCTGCGCACGTTAAGAAGCAGTACGAGGAGTTGAGGATGCAACACGAAAAGAGGCATAG
AATCAAACGATCCTCGTTGGCGAATCTTTTCGGCTCAGTACATGCAAATCCAGGAATCCC
AGGAGACATCGTCTACTCCGACCCGTACATTGAGAATTTGCAGTTTGAGATGGACGGCAG
AATACCGCCCGGCACCGTAGTCACGATGGCCGAGTTGAGGTTGTTCAAGAAAGTGGCGGA
CCTCGAGAAGCTCCGCTGGATCGGCAGAAGACAAGGGAGAAGATACAGGAATCTCCATCC
GTCTGTGTTTCTGCGTAATCACCCGGGCAGGTTCATGAAACCGGTGCGCCACGCGAGAGT
GTCGATTTATCACAATCTGTTCAATCCCGACGGCACCGTCAAGTCCACGTTAGTAGATTC
GAGAAAAATCCACGTCAACGGATCAGGCTGGCAGGCTTTCGACGTCACCAACGCCGTCCA
CCAATGGCAGTTGCATCCGACCAGAATGATGACCATGACTCTCGAGATGTGGATTGAAGG
GACCAGACCCACGCGGCACGCGGCCAACATCGCTAAACTTGTCAGATTCACTGGGCAGAA
AGAACGGCTTAGAGGTCAAGGCTACAGGCCGGAATTGGTGGTTTTCACCAGGGAAGAGAG
AGCCAGTCGCGTCAGAGAGTGCCGGCCCAACCCCAATCCAAAGCGGCGGAAGTGTTGCCG
AGACAACCATTACGTCAGTTTCCGCGACATCGAATGGACCAAGTTCTGGATTTTGGAACC
GGCCGGGTACCAAGCGTTCCGTTGCGACGGGAAATGCTCGGCCAGTCGGCGGAACGGATT
TTCGCGCTCTTGCTCTG
| PANTHER |
TGF-beta-rel (IPR015615) - T[13-320] 5.9E-90 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[15-224] 1.9E-15 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[257-325] 16.204 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[266-324] 2.7E-11 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[271-321] 5.59E-11 |
| Pfam |
TGF-b_C (IPR001839) - T[277-316] 2.1E-9 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[297-312] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LFTY2_HUMAN | 30.464 % | 124 | 1.09E-32 |
| LFTY1_HUMAN | 28.808 % | 115 | 1.22E-29 |