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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr13.g06301.01.t

Possible name(s)

TIMP2; TIMP3; TIMP4

Location

chr13 [11,287,660 / 11,292,687]

Sequences

Amino acid sequence

Length: 290

>Boschl.CG.Botznik2013.chr13.g06301.01.p
MFCHSDFVVKAFVRTSRVVELRPNGKYRQVDIQKPDLIALPEISDENATVGYTPSVDSNT
SPEESTEPSSVETPEYSVESDESPDVDINQNTGPAVTTDANDTSIIRRKRMARHRRYYAG
YAPGMSPEPVTPTSTTMVQYRISITRVFKGLQNFTEKQMKFVYTPPAPLCNVKLSTERTP
YILMGTLHKGVMMIRMCDFKLDFSKLTKSEKKNVIHNMERRFPESCESCAVKVCNGYNCN
EPPNEEVLCEWRNARTAPTPEACQYSCVRTKSGKCKWYNPLDKKDSSSAP

Nucleotide sequence

Length: 873

>Boschl.CG.Botznik2013.chr13.g06301.01.t
TGTTTTGCCATTCTGATTTCGGCGTAAAGGCGTTTGTGAGAACGTCTCGCGTGGTCGAAC
TGAGACCAAACGGAAAGTACAGACAAGTTGACATACAAAAGCCGGACCTAATTGCATTGC
CTGAAATAAGCGATGAGGACGCTACTGTTGGATACACACCATCAGTTGATAGCAATACAT
CTCCGGAGGAATCCACGGAGCCCAGCAGTGTCGAAACACCGGAATACAGTGTCGAATCGG
ACGAAAGTCCTGACGTGGACATTAATCAAAACACAGGACCGGCAGTAACCACCGATGCCA
ACGGCACAAGCATAATCCGACGAAAACGCATGGCTAGGCACCGACGATATTACGCCGGAT
ACGCACCAGGTATGAGTCCTGAACCAGTTACGCCGACCTCAACGACGATGGTACAATACA
GAATAAGCATTACGAGGGTATTCAAAGGACTACAGAATTTCACAGAAAAGCAAATGAAAT
TCGTCTATACTCCGCCGGCACCACTTTGCAATGTGAAACTTTCCACCGAAAGAACGCCTT
ACATCCTGATGGGAACACTGCATAAAGGAGTGATGATGATTCGAATGTGCGACTTCAAGT
TGGATTTCAGCAAGCTGACAAAGTCGGAAAAGAAAAACGTCATCCATAACATGGAGCGCC
GGTTTCCCGAATCTTGCGAATCGTGTGCGGTCAAAGTGTGCAATGGTTACAACTGTAACG
AGGCACCGAACGAGGAGGTTTTGTGCGAATGGAGAAACGCACGGACGGCCCCAACGCCTG
AAGCCTGTCAGTATTCATGCGTGCGAACCAAGTCAGGAAAATGCAAATGGTACAACCCGC
TCGACAAGAAAGATTCTAGCAGCGCTCCCTAGA

InterProScan

PANTHER
TIMP (IPR001820) - T[2-282] 4.8E-28
SUPERFAMILY
TIMP-like_OB-fold (IPR008993) - T[2-20] 1.07E-23 - T[133-279] 1.07E-23
SMART
TIMP (IPR001820) - T[122-277] 3.8E-6
Pfam
TIMP (IPR001820) - T[131-277] 6.5E-21
Gene3D
TIMP_C (IPR027465) - T[200-282] 4.9E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value