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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g34425.01.t
Possible name(s)
ALDH1A1; ALDH1A2; ALDH6A1
Gene model
Location
chr13 [15,800,639 / 15,807,370]
Amino acid sequence
Length: 523
>Boschl.CG.Botznik2013.chr13.g34425.01.p
MLRSQKLLTKVLGSARTLKTCQYSSGATTKLFIDGKFIESKTDRWIDLHNPATNEVITRV
PESTQQEMEAAAAAASRTFPAWADMSVMSRQQIMFKYQQLIKENQSEIAKLITLEQGKTL
VDAEGDVLRGLQVVEHCCSITSLALGESLSSIAKDMDTITYRYPLGVCAGITPFNFPAMI
PLWMFPMAMVCGNTYVLKPSERDPGATMFLAKLAQDAGFPDGTLNIIHGSKDAVNFVCDN
PAIRAISFVGSNQAGEYIHDRGSRNGKRVQSNMGAKNHGVVLPDANKENTLNQLVGAAFG
AAGQRCMALSTAVFVGDSKEWVKDLEERAKKLKVNAGDQPDADLGPVISPEAKQRICELV
QSGVNEGANLLLDGRDVTVPGYEKGNFVGPTILSGVKPNMECYREEIFGPVLVILEADTL
DDAISMINDNPYGNGTAIFTSSGATARRFINEIDVGQVGVNVPIPVPLPMFSFTGSRASF
RGDVNFYGKQGIQFYTQVKTVTQLWRQEDVSHSKAAVAMPVMR
Nucleotide sequence
Length: 1,572
>Boschl.CG.Botznik2013.chr13.g34425.01.t
CATGTTGCGCTCTCAAAAATTATTGACCAAGGTTCTTGGTTCGGCGAGAACTTTGAAAAC
ATGCCAATATTCGTCAGGGGCGACAACAAAGTTGTTCATCGACGGAAAATTCATAGAGTC
GAAGACGGACCGTTGGATTGATCTCCATAATCCGGCCACTAATGAGGTCATCACCCGCGT
TCCCGAGTCCACTCAGCAGGAGATGGAAGCGGCCGCAGCCGCGGCCTCCCGCACTTTTCC
AGCCTGGGCTGACATGTCCGTCATGTCGAGACAGCAAATCATGTTCAAATACCAACAGCT
CATCAAAGAGAATCAGTCTGAAATCGCGAAACTGATCACGTTGGAACAAGGCAAGACTTT
GGTAGACGCTGAAGGCGACGTGCTGCGAGGCTTGGAGGTTGTCGAGCATTGCTGCAGCAT
CACGTCGTTGGCTCTCGGAGAATCACTGTCTTCCATTGCCAAAGACATGGACACCATTAC
GTACAGATATCCGCTCGGTGTGTGTGCCGGTATCACCCCGTTCAATTTTCCTGCCATGAT
ACCGCTTTGGATGTTTCCGATGGCTATGGTTTGTGGCAACACCTATGTTTTGAAACCATC
TGAGCGCGATCCGGGCGCGACCATGTTCTTAGCGAAATTGGCTCAAGATGCCGGCTTTCC
AGATGGTACCTTGAACATCATACATGGATCCAAAGACGCGGTGAATTTCGTCTGCGACAA
TCCCGCGATACGAGCGATTTCGTTCGTGGGCTCAAACCAGGCCGGAGAATACATCCACGA
CCGTGGCTCTCGTAACGGAAAGAGGGTGCAATCCAATATGGGCGCTAAGAATCACGGCGT
GGTGCTGCCAGACGCGAATAAGGAAAATACCCTTAATCAATTGGTGGGGGCCGCGTTTGG
GGCGGCCGGACAACGATGCATGGCGTTGTCGACTGCGGTTTTCGTCGGGGATTCAAAGGA
ATGGGTCAAGGACTTGGAGGAGAGAGCTAAGAAGCTGAAAGTCAACGCCGGGGACCAACC
CGACGCCGATCTCGGCCCGGTCATATCTCCCGAAGCCAAGCAGAGAATTTGCGAGCTGGT
CCAGTCTGGCGTTAACGAAGGAGCCAATCTACTGTTGGACGGACGCGACGTCACGGTCCC
TGGTTATGAGAAAGGGAATTTTGTCGGACCCACCATCTTGTCTGGAGTCAAGCCCAACAT
GGAGTGTTACAGGGAAGAGATCTTCGGGCCCGTGCTGGTCATTCTGGAGGCGGACACTTT
GGACGACGCGATATCGATGATCAACGACAATCCGTACGGAAACGGAACTGCTATTTTCAC
ATCCAGCGGTGCAACGGCTAGAAGGTTCATTAACGAAATTGATGTGGGCCAGGTGGGAGT
GAATGTACCTATTCCGGTTCCATTGCCAATGTTTTCCTTCACTGGTTCGCGAGCATCATT
TCGGGGCGATGTCAACTTCTATGGCAAGCAGGGTATTCAATTCTACACTCAAGTAAAGAC
TGTTACCCAGCTCTGGAGGCAAGAGGACGTTTCTCATTCCAAGGCGGCCGTCGCCATGCC
TGTCATGCGATA
| PANTHER |
MeMal-semiAld_DH (IPR010061) - T[16-522] 1.2E-286 |
| Gene3D |
Ald_DH_N (IPR016162) - T[20-274] 1.4E-77 |
| SUPERFAMILY |
Ald_DH/histidinol_DH (IPR016161) - T[23-503] 1.06E-140 |
| CDD |
MeMal-semiAld_DH (IPR010061) - T[29-505] 0.0 |
| TIGRFAM |
MeMal-semiAld_DH (IPR010061) - T[30-505] 1.6E-249 |
| Pfam |
Aldehyde_DH_dom (IPR015590) - T[38-501] 3.5E-139 |
| Gene3D |
Ald_DH_C (IPR016163) - T[276-508] 1.5E-63 |
| ProSitePatterns |
Ald_DH_CS_CYS (IPR016160) - T[299-310] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MMSA_HUMAN | 74.747 % | 817 | 0 |
| AL1A2_HUMAN | 31.405 % | 222 | 4.56E-66 |
| AL1A1_HUMAN | 32.305 % | 224 | 3.49E-67 |