- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g34997.01.t
Possible name(s)
LOXL2; LOXL3; LOXL4
Gene model
Location
chr13 [15,894,687 / 15,901,651]
Amino acid sequence
Length: 406
>Boschl.CG.Botznik2013.chr13.g34997.01.p
MPPYFVVVLLLFVTDSKSQATSEQENAEETLKIRLRGGEVASEGRIEVKFGEEWGTVCDD
DWSLRGAEVACRMMGFDGAIDFVHSGGFGPGEGAILLDNVDCNGDEKSLIDCKHRPLGEN
DCSHHEDAGVKCNQRKIPHYLLKNWVTASEGLTNMRIKPPRAVRKRLPYLFGRLEILHAE
KWRVLCSDGWNQRNAKVVCGQLGFPGATEIGETEHQTGRKGSFWLTNVSCSGDETQLDQC
HFNFLNFTIKEKCPTGKAVYIRCTAGDPYTLSTMKKKMKRRHRLHHHIPKKFTEPYELIR
LKGGPSIGEGRLEIVRDGRWGTVCHNHFDMRDASVACRQLGFGTAKRVVTHSYYGMAHGP
IWMTDVSCNEGCTHYGEVGISCHVPDLGLARRVFSHFVLCSPYCNI
Nucleotide sequence
Length: 1,221
>Boschl.CG.Botznik2013.chr13.g34997.01.t
GATGCCGCCGTACTTTGTCGTAGTTCTATTATTATTTGTGACCGATTCCAAGTCCCAGGC
TACGTCCGAGCAAGAAAATGCCGAGGAAACTCTGAAGATTAGGTTGCGAGGCGGTGAAGT
GGCCTCTGAAGGACGAATAGAAGTGAAGTTTGGCGAAGAGTGGGGGACAGTGTGTGATGA
CGATTGGTCTTTGCGCGGCGCAGAAGTAGCGTGCCGAATGATGGGATTCGACGGGGCTAT
CGATTTTGTACATAGCGGCGGATTTGGTCCAGGAGAAGGCGCTATCTTACTCGACAATGT
GGACTGCAATGGCGACGAGAAATCTCTGATAGATTGCAAGCATCGTCCGTTAGGTGAGAA
TGACTGCTCGCATCATGAGGACGCCGGAGTGAAATGCAACCAACGGAAGATACCACATTA
TTTGCTGAAGAACTGGGTGACGGCCAGTGAAGGTCTAACAAATATGCGGATAAAGCCGCC
GCGAGCAGTCCGAAAGCGTCTACCCTATTTGTTCGGACGCTTGGAAATCCTCCATGCTGA
GAAGTGGCGCGTCTTATGCTCGGATGGGTGGAATCAAAGAAATGCCAAAGTAGTATGCGG
ACAACTTGGTTTTCCGGGAGCAACTGAGATCGGCGAGACAGAGCATCAAACTGGGAGGAA
AGGTAGTTTCTGGTTGACTAATGTTTCGTGCTCTGGCGATGAAACCCAGCTTGACCAATG
TCACTTCAACTTTCTGAATTTTACAATCAAAGAGAAATGTCCAACAGGAAAAGCTGTTTA
TATCCGATGCACTGCCGGCGATCCATACACCTTATCGACAATGAAGAAAAAGATGAAAAG
AAGACACCGTCTGCATCACCATATTCCTAAAAAATTCACGGAACCCTACGAGCTTATCCG
GCTAAAAGGGGGCCCGTCCATCGGAGAGGGGAGATTGGAGATCGTGCGTGATGGTCGGTG
GGGGACTGTTTGCCACAATCATTTCGACATGAGGGATGCGAGTGTAGCATGTCGACAACT
TGGATTTGGAACGGCAAAGAGAGTCGTGACTCATTCATATTACGGAATGGCACATGGTCC
GATATGGATGACAGACGTTTCATGCAACGAAGGATGCACCCATTACGGCGAAGTCGGAAT
ATCGTGTCACGTGCCGGACTTGGGCTTAGCGAGACGGGTATTTTCACATTTCGTATTATG
CTCCCCTTACTGTAACATATG
| SUPERFAMILY |
SRCR-like_dom_sf (IPR036772) - T[29-134] 1.57E-35 - T[171-268] 9.16E-24 - T[299-383] 5.1E-26 |
| Gene3D |
SRCR-like_dom_sf (IPR036772) - T[31-140] 1.5E-37 - T[163-268] 7.2E-25 - T[294-386] 3.5E-24 |
| SMART |
SRCR-like_dom (IPR017448) - T[33-133] 3.1E-50 - T[155-264] 5.8E-17 - T[299-383] 3.5E-24 |
| PRINTS |
SRCR (IPR001190) - T[33-49] 3.6E-18 - T[52-63] 3.6E-18 - T[67-77] 3.6E-18 - T[98-112] 3.6E-18 - T[121-133] 3.6E-18 |
| ProSiteProfiles |
SRCR (IPR001190) - T[33-133] 29.858 - T[160-264] 19.758 - T[299-405] 20.505 |
| Pfam |
SRCR (IPR001190) - T[37-133] 1.8E-29 - T[172-263] 6.7E-22 - T[303-371] 2.3E-17 |
| ProSitePatterns |
SRCR (IPR001190) - T[38-75] . - T[304-341] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LOXL2_HUMAN | 32.911 % | 238 | 1.45E-71 |
| LOXL3_HUMAN | 33.503 % | 231 | 4.2E-69 |
| LOXL4_HUMAN | 33.663 % | 228 | 9.1E-68 |