- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g62207.01.t
Possible name(s)
TUBA1A; TUBA3C; TUBA3D
Gene model
Location
chr13 [2,329,761 / 2,334,079]
Amino acid sequence
Length: 456
>Boschl.CG.Botznik2013.chr13.g62207.01.p
MPSDKTIGSAEDSFNTFFSETGSGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLISG
KEDAANNYARGHYTVGKEMIDQVLDRVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NMDIERPSYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPI
ISAEKAYHEQLSVSEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAGI
KTKRTIQFVDWCPTGFKVGLNYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWSRLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGLDSSSCRSFRGFAVSTIDC
GRCGKWTVILTVFNIEINAYYTELAVETCQSEVDHR
Nucleotide sequence
Length: 1,371
>Boschl.CG.Botznik2013.chr13.g62207.01.t
AATGCCAAGCGATAAGACTATCGGAAGCGCCGAAGATTCCTTCAACACATTTTTCAGTGA
AACGGGCTCCGGAAAGCACGTACCGCGAGCGGTATTCGTTGACTTGGAGCCTTCAGTGAT
TGACGAGATCAGAACGGGCACGTACCGTCAACTATTCCATCCCGAACAGTTGATCTCTGG
CAAAGAGGATGCCGCGAACAATTACGCCAGAGGACACTACACCGTTGGGAAAGAAATGAT
CGACCAAGTTCTTGACCGTGTCAGAAAGCTCTCGGACCAATGCACCGGTCTTCAAGGCTT
CCTCATATTTCATTCCTTCGGTGGAGGAACCGGATCCGGTTTCGCGTCGCTGCTGATGGA
GCGTTTGTCGGTTGATTACGGAAAGAAATCTAAACTTGAGTTTGCGATATATCCGGCTCC
ACAGATTTCGACTGCCGTTGTAGAGCCGTACAATTCCATTCTCACGACACACACTACTCT
TGAGCATTCCGATTGCGCTTTTATGGTTGACAACGAAGCGATTTACGACATCTGTCGTCG
CAATATGGATATCGAACGCCCTTCGTACACCAACTTGAACCGTCTAATCGCACAGATAGT
GTCGTCTATCACTGCCTCTCTGCGATTCGACGGTGCGTTGAACGTAGATCTCACCGAGTT
CCAGACGAATCTGGTGCCCTACCCTCGTATTCACTTCCCCCTGGTGACGTACGCCCCGAT
CATTTCCGCGGAGAAGGCCTACCATGAGCAGTTGTCGGTGTCCGAGATTACGAACGCGTG
TTTCGAGCCTGCCAACCAAATGGTGAAATGCGACCCTCGCCACGGGAAGTACATGGCATG
TTGCATGTTGTACAGAGGCGACGTTGTGCCCAAGGATGTGAACGCGGCCATCGCCGGCAT
CAAGACTAAAAGAACTATCCAGTTCGTGGACTGGTGCCCGACTGGATTCAAAGTCGGACT
CAACTATCAGCCTCCCACTGTTGTACCCGGTGGTGACTTGGCCAAAGTGCAGCGAGCCGT
TTGTATGTTGAGCAACACCACCGCCATTGCGGAAGCCTGGAGTCGCCTCGATCACAAATT
CGACTTGATGTACGCCAAACGCGCGTTTGTTCATTGGTACGTCGGTGAAGGTATGGAGGA
AGGCGAATTCTCCGAAGCCCGCGAAGATCTCGCGGCGTTGGAGAAGGACTACGAAGAAGT
CGGGCTCGACTCGTCGTCTTGCCGGTCATTTCGTGGATTTGCGGTATCAACAATCGACTG
CGGTCGGTGCGGGAAGTGGACTGTGATATTAACGGTTTTCAATATAGAAATTAACGCGTA
TTACACAGAACTTGCTGTGGAAACTTGTCAATCTGAGGTCGACCACAGATG
| PANTHER |
Tubulin (IPR000217) - T[1-406] 6.8E-280 |
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-233] 1.6E-109 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[5-209] 5.23E-83 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[7-178] 6.0E-55 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[10-23] 9.0E-107 - T[53-66] 9.0E-107 - T[85-93] 9.0E-107 - T[113-125] 9.0E-107 - T[126-137] 9.0E-107 - T[179-191] 9.0E-107 - T[239-254] 9.0E-107 - T[286-307] 9.0E-107 - T[312-325] 9.0E-107 - T[325-344] 9.0E-107 - T[350-366] 9.0E-107 - T[387-403] 9.0E-107 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[14-211] 1.1E-82 |
| PRINTS |
Tubulin (IPR000217) - T[18-37] 1.6E-79 - T[60-71] 1.6E-79 - T[73-97] 1.6E-79 - T[99-117] 1.6E-79 - T[118-139] 1.6E-79 - T[143-156] 1.6E-79 - T[157-177] 1.6E-79 - T[345-373] 1.6E-79 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[107-113] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[211-400] 7.32E-87 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[213-358] 4.1E-58 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[228-356] 1.8E-51 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[234-348] 1.8E-66 |
| Gene3D |
Tubulin_C (IPR023123) - T[349-402] 2.5E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA1A_HUMAN | 93.069 % | 783 | 0 |
| TBA3C_HUMAN | 93.564 % | 787 | 0 |
| TBA3D_HUMAN | 93.564 % | 787 | 0 |