- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C1.416.v1....' >
- Transcript 'Cisavi.CG.ENS81.R48....' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr13.g69843.01.t
Possible name(s)
BOC; CDON; DSCAML1
Gene model
Location
chr13 [17,582 / 23,467]
Amino acid sequence
Length: 555
>Boschl.CG.Botznik2013.chr13.g69843.01.p
MYGILSRDALIYHAFTRAVCNTDVESTPTTVTEITPQVPAERIRVPRPPSKLRVNKISAR
QVSLMWSARGNGGSPIIGYKVQVKVDKGEWETHGQTKNYPYEIAGLKRGKFYRFRIIAFN
SKGDSKPSHSSKSFPRRPKSLSHRPEILAAIAEQWDTIRVEWEYDMAPAQINGYYIYYRP
TDSDDEADYVKKIYDSVPSFAYKIKNLQPGTQYDVKMQAYNRLGPSPFSNVIITEVPKGP
SRSEGDEDQQDDYRSDVNDPARAQSHRRSMIYLISGIIVAAILVVLLFTVFCYWKKRAAK
QRESTPPSKTNHGNSAGYSAGKQCDHIGMSKLNPSGHTPPHKACSANHSPTDTKCHCSRH
HSNHSSLGRDATSYHSYPVSPVGFEYVTPNGGYPGINGAPMHVIMDPRHYGIGRWVRGGE
FCHIIPVDARKMSADASQREVTRVNASGQMVTRAFDGNVTTDAVRHDHGYHSNDDGARTG
SDSQLEISEDVSNQSDTDAGTSGIATILEAPADSSSPTPEEGLIRNTDSKTGVSSNCEGN
VEVESTPFLISDDKS
Nucleotide sequence
Length: 1,668
>Boschl.CG.Botznik2013.chr13.g69843.01.t
TATGTACGGTATCCTATCGCGGGACGCATTGATTTATCATGCATTTACGCGCGCTGTTTG
CAACACAGATGTCGAATCCACGCCTACGACCGTCACAGAAATCACGCCGCAAGTACCTGC
AGAAGGTATTCGCGTGCCGCGACCCCCGTCCAAGCTGCGCGTGAACAAGATCTCGGCCCG
GCAAGTCTCTCTCATGTGGAGCGCCCGCGGTAACGGGGGCTCGCCGATTATAGGATACAA
GGTGCAAGTCAAAGTGGACAAGGGAGAGTGGGAAACCCACGGGCAGACTAAAAACTATCC
TTACGAAATCGCGGGCTTAAAAAGAGGGAAGTTTTACCGGTTTCGAATCATCGCGTTCAA
CAGCAAGGGCGACTCTAAGCCTTCGCATTCGTCCAAGTCCTTCCCGAGGAGGCCAAAATC
CCTGAGTCACCGACCCGAGATACTCGCCGCGATCGCGGAACAGTGGGACACCATCAGAGT
GGAATGGGAGTACGACATGGCCCCCGCGCAAATCAACGGATATTACATCTACTACCGGCC
GACTGACTCCGACGACGAGGCAGATTACGTGAAAAAGATCTACGACTCCGTGCCATCTTT
TGCATACAAAATCAAAAACCTACAGCCCGGCACGCAGTACGATGTCAAAATGCAGGCGTA
CAATCGGCTGGGTCCATCTCCGTTCTCAAACGTGATCATAACTGAGGTTCCCAAAGGCCC
GTCGCGTTCAGAAGGGGATGAAGACCAACAAGACGACTACAGGTCGGACGTGAACGACCC
TGCGCGGGCTCAATCGCACAGACGCAGCATGATCTACCTCATAAGCGGCATCATCGTGGC
CGCCATTTTGGTGGTGTTGCTTTTCACCGTGTTCTGTTATTGGAAGAAGCGCGCCGCGAA
ACAGCGCGAGTCGACGCCGCCGTCCAAGACGAATCACGGGAATTCAGCTGGGTACAGCGC
CGGGAAGCAATGCGACCACATCGGCATGTCCAAACTGAACCCAAGCGGGCACACGCCTCC
ACACAAAGCCTGTAGCGCCAACCACTCTCCCACAGACACAAAGTGCCACTGTTCTCGCCA
CCACAGCAATCATTCCAGCCTAGGCCGAGACGCAACAAGCTACCACTCTTACCCTGTGTC
TCCAGTTGGATTCGAATACGTTACACCCAACGGGGGTTATCCCGGAATAAACGGAGCGCC
AATGCACGTTATCATGGACCCGAGACATTACGGGATAGGGAGATGGGTTCGCGGCGGCGA
ATTTTGCCATATTATCCCGGTCGACGCGCGTAAAATGAGCGCCGACGCGAGCCAGCGCGA
GGTAACGCGCGTCAACGCGAGCGGGCAGATGGTGACGCGCGCGTTCGACGGCAACGTGAC
TACGGACGCTGTCAGACACGATCACGGTTATCATAGTAACGATGATGGCGCGCGTACAGG
GTCTGATTCGCAGCTAGAGATATCGGAAGATGTCTCAAATCAAAGCGACACAGACGCCGG
TACTTCAGGTATTGCGACTATACTAGAGGCGCCTGCGGACAGTAGCTCGCCCACGCCGGA
GGAAGGGTTAATTAGAAACACAGACTCTAAAACAGGCGTGTCTTCAAACTGTGAAGGCAA
TGTCGAAGTTGAATCGACGCCTTTTTTAATATCGGACGATAAGAGCTG
| Gene3D |
Ig-like_fold (IPR013783) - T[40-136] 4.9E-22 - T[137-242] 1.0E-17 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[45-238] 4.37E-33 |
| CDD |
FN3_dom (IPR003961) - T[46-131] 3.79889E-15 - T[145-232] 1.70463E-11 |
| SMART |
FN3_dom (IPR003961) - T[46-125] 4.0E-11 - T[142-226] 1.6E-6 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[48-139] 17.689 - T[144-239] 18.225 |
| Pfam |
FN3_dom (IPR003961) - T[48-128] 8.4E-13 - T[144-229] 9.8E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CDON_HUMAN | 31.464 % | 133 | 1.08E-32 |
| BOC_HUMAN | 32.313 % | 130 | 9.74E-32 |