- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Clone 'cilv019b15' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr1.g32294.01.t
Possible name(s)
GLI1; GLI2; GLI3
Gene model
Location
chr1 [9,582,378 / 9,596,674]
Amino acid sequence
Length: 753
>Boschl.CG.Botznik2013.chr1.g32294.01.p
MEGLRARPKAVQGAVHACGSHASPYWRETAQMHGTIRLVYLRTYVMPHCDDLQFEGCSKA
YSRLENLKTHLRSHTGEKPYVCEYPGCSKAFSNASDRAKHQNRTHSNEKPYVCRIPNCTK
RYTDPSSLRKHVKTVHGPDAHVTKRMKAEREREEAKKMEDDRTVKQEADSVRKDEKDQNN
NNQPPGQGCSPISPGSQNGAGDTNGPGNLNPRSNQSTCTSGSDMSTTPQNSPHAHHPYNN
NDSGVELNAGYGHDHDSDGDIVVDENPLPDSTSGGVGLQSRRRTSLRQNIIPRMVNQKMQ
SLSIGNAGMNPPGMGTDALGEYILPSFPNPKTERGSNHSPYPHFPQQGSGDGTNEVSSTT
LINAQNHARPPSKPSHHSKTLPGGLAPMNRHMTLLAPDRRDSGTSSGHPSRKPSAVSNAS
RRSSQNTNQVLVNGSYDPISLGSSRKSSGISVAPGNSGAASSPMLPSLNPYTLHRLTSKF
NEVTGRPPPTPLDRDTYTRSQIGKWLQEDAVARSNAQHTGNTSYHTSMAPPMAPPPHHHN
SSATPNRRRSDAPFNRATRTPLPQEISGNANRRASDPVRKTSQQQFDQNRPSNVQRYYSW
NNMNPLPGIRNYHNADKQIPTGPPGMQGYNNFLSAGNLNVARQRSDSNGSFFSSESGYQS
NGSNMALNNAGDYQASPMANVESQPYFNSRHASQQGYHNMPGVNENILQENLNADIMSGV
NGMYPQNNSHDSRHISPAGIYRQHSAVACVRQL
Nucleotide sequence
Length: 2,262
>Boschl.CG.Botznik2013.chr1.g32294.01.t
GATGGAAGGACTGCGCGCGAGACCAAAAGCCGTTCAAGGCGCAGTACATGCTTGTGGTTC
ACATGCGTCGCCATACTGGCGAGAAACCGCACAAATGCACGGTACGATTAGGCTTGTGTA
TTTACGTACGTATGTTATGCCTCATTGCGATGATTTACAGTTTGAGGGATGCAGCAAAGC
GTATTCACGACTTGAGAACCTAAAGACTCATTTACGATCACATACCGGCGAAAAACCGTA
CGTTTGCGAGTATCCGGGGTGCTCGAAAGCTTTCAGCAACGCCTCGGATAGAGCTAAACA
TCAGAACAGGACGCATTCTAATGAGAAACCGTACGTCTGCCGCATTCCAAACTGCACGAA
GCGTTACACCGATCCCAGCTCGCTGCGTAAACACGTCAAGACGGTTCACGGCCCAGACGC
TCATGTTACGAAGCGCATGAAAGCCGAGAGGGAGAGAGAGGAAGCGAAGAAAATGGAGGA
CGACCGCACTGTGAAACAGGAAGCGGACTCGGTGCGGAAAGACGAAAAAGATCAGAATAA
TAATAATCAACCGCCGGGACAAGGATGCAGTCCGATTTCTCCTGGAAGTCAAAATGGAGC
CGGAGACACGAACGGCCCCGGAAACCTCAATCCCCGAAGCAATCAGTCCACGTGCACTTC
CGGCTCGGATATGTCGACGACCCCGCAAAACTCGCCGCACGCCCATCATCCGTATAACAA
CAACGATTCCGGAGTCGAGCTGAACGCCGGATACGGGCACGATCACGACAGCGATGGGGA
CATCGTCGTGGATGAGAATCCACTGCCAGACTCTACATCGGGCGGCGTAGGACTGCAATC
TCGCAGGCGGACATCCCTACGTCAAAACATCATTCCGCGGATGGTGAATCAGAAGATGCA
AAGCCTGTCGATTGGAAACGCCGGCATGAACCCGCCCGGTATGGGAACAGACGCGCTGGG
GGAGTACATCCTGCCTTCGTTTCCCAACCCCAAGACCGAGCGGGGGTCAAACCACTCGCC
GTACCCGCATTTTCCGCAGCAAGGTAGCGGTGACGGTACCAATGAAGTCTCGTCTACGAC
TTTAATCAACGCTCAAAACCACGCGCGGCCTCCCAGCAAACCATCTCATCATTCCAAGAC
CCTCCCTGGCGGCTTGGCACCGATGAATCGACATATGACGCTGCTGGCACCCGATAGAAG
AGACAGCGGCACCAGCTCCGGGCACCCGAGCAGAAAGCCATCGGCGGTATCGAACGCTAG
TAGGCGATCTAGCCAGAACACAAACCAAGTTCTCGTAAACGGCTCCTACGACCCGATATC
GCTCGGATCCTCAAGAAAGTCAAGCGGAATATCAGTAGCGCCAGGTAATTCAGGCGCAGC
CTCGTCGCCGATGCTGCCGTCGCTAAATCCGTACACTTTGCATCGCTTGACCTCCAAGTT
TAACGAAGTCACGGGAAGGCCGCCACCGACGCCGTTGGACCGAGATACCTACACCAGGAG
TCAAATCGGGAAATGGCTGCAAGAAGACGCGGTCGCTCGATCTAACGCGCAGCATACCGG
GAATACGAGTTACCACACCAGCATGGCGCCACCCATGGCTCCGCCTCCGCACCATCATAA
TTCGTCGGCCACTCCGAACAGAAGACGCAGTGACGCGCCGTTCAACAGAGCCACCAGAAC
CCCGCTCCCTCAGGAGATATCTGGCAACGCGAACAGGAGGGCCAGTGATCCGGTTCGCAA
GACATCGCAGCAGCAATTCGATCAGAACCGACCGTCAAACGTACAACGCTACTACAGTTG
GAACAACATGAATCCGTTACCAGGAATAAGAAACTATCACAACGCGGACAAACAAATTCC
AACCGGCCCTCCTGGGATGCAAGGCTACAACAATTTCCTATCGGCTGGAAACTTGAAGGT
AGCGCGGCAACGGTCCGACAGCAACGGCAGCTTCTTCAGCAGCGAAAGCGGCTATCAAAG
CAACGGCAGTAACATGGCTCTCAACAATGCCGGCGACTATCAAGCTTCTCCTATGGCTAA
TGTGGAAAGCCAGCCTTACTTCAACAGCAGGCACGCCTCCCAGCAGGGATATCATAACAT
GCCTGGAGTAAATGAGAATATCCTGCAAGAGAATTTGAATGCGGACATCATGTCTGGCGT
CAATGGGATGTATCCGCAGAATAACTCTCACGATTCCCGACACATATCTCCAGCAGGAAT
TTATCGACAGCATTCCGCCGTTGCATGTGTCCGGCAGCTTTG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[47-79] 12.882 - T[80-110] 13.817 - T[111-141] 10.201 |
| SMART |
Znf_C2H2_type (IPR013087) - T[53-74] 54.0 - T[80-105] 0.0068 - T[111-136] 0.0012 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[60-115] 1.59E-17 - T[109-136] 5.38E-8 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[82-105] . - T[113-136] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GLI1_HUMAN | 44.286 % | 192 | 6.49E-51 |
| GLI2_HUMAN | 45.882 % | 194 | 1.23E-51 |
| GLI3_HUMAN | 75.439 % | 191 | 1.26E-50 |