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  1. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr1.g42000.01.t

Possible name(s)

TFG

Gene model

Boschl.CG.Botznik2013.chr1.g42000

Location

chr1 [5,313,037 / 5,314,441]

Sequences

Amino acid sequence

Length: 467

>Boschl.CG.Botznik2013.chr1.g42000.01.p
MDLSGKLIIKARLGDDVRRIPIHNEDLTYNELLLMMQRVFRNTLQPTDEVTIKYADDDGD
LITIFDDSDITLAIQLSRVLKLTLFCQGEKGEISVPRAKNIRSELVDIRNRINNILDSXG
EVVDDNPEEKGGVKAEQPSYSASQEQEPQPHVEATLVQDAGSSEASKSYNSMFDPLTDAA
KTQSLPGQGEERDRVASPAGSHISKGSAGYAPDTLPQSQPAQHQNSVQSSFAPSADQTQN
SQQHQSSLQSSFGDAALPGQQYGATDPKSQYGAPDLKSQYGASTQQPGYYGNAAASQSVV
TQAGSSYPMQTTPTVPNSAVSYNNQYPSGQGSYPQAGGMPPAPQQRQPGYTTPASQHPAG
MPNSGQYNYGMRAPTPTNPNPMPPSQSTVASSQPYGMAPTSSAAMPYSAGGPPQQMQSYG
AASTPPPSMSYPPGAPGGSYGQPPTNPHRLIRGGGAYRARQPGPGYQ

Nucleotide sequence

Length: 1,404

>Boschl.CG.Botznik2013.chr1.g42000.01.t
TGGATCTGAGCGGAAAATTGATCATCAAAGCCCGTCTCGGCGATGACGTCAGAAGAATAC
CCATTCACAATGAAGACCTGACGTATAACGAATTGCTTCTCATGATGCAACGAGTGTTTC
GCAACACTTTACAACCTACAGACGAAGTCACAATCAAATACGCTGACGACGATGGGGATT
TAATCACGATTTTCGACGACTCCGACATTACTCTCGCAATTCAGTTGAGTCGCGTTTTGA
AGCTCACGCTGTTCTGCCAGGGAGAGAAGGGCGAAATATCAGTTCCCAGAGCGAAAAACA
TAAGATCCGAATTGGTAGATATAAGGAACAGGATCAACAACATACTGGATTCTCTNGGTG
AAGTCGTTGACGATAATCCAGAAGAAAAAGGTGGCGTTAAAGCGGAACAACCAAGCTATT
CTGCTTCGCAAGAGCAAGAACCGCAACCGCATGTGGAGGCTACACTTGTTCAAGACGCAG
GTAGTTCTGAAGCATCAAAGTCTTACAATTCTATGTTCGATCCGCTTACGGATGCGGCTA
AAACTCAATCATTGCCCGGCCAAGGCGAGGAGAGGGATAGGGTCGCAAGTCCTGCCGGAA
GTCATATTAGTAAAGGGTCGGCAGGTTATGCCCCCGACACTTTACCGCAATCGCAGCCGG
CTCAACACCAAAACTCGGTGCAATCATCTTTCGCTCCTAGCGCCGATCAGACGCAAAATT
CTCAGCAACACCAAAGTAGTTTGCAATCTTCTTTCGGCGATGCTGCCCTACCCGGGCAAC
AATATGGAGCCACGGATCCTAAATCTCAGTATGGAGCACCAGATCTAAAGTCTCAGTATG
GAGCGTCAACTCAGCAACCAGGGTATTACGGTAACGCTGCTGCTTCTCAAAGTGTTGTCA
CGCAAGCGGGATCTTCTTATCCCATGCAAACAACTCCAACCGTCCCAAATTCGGCAGTGT
CCTACAATAATCAGTACCCTTCTGGGCAAGGAAGTTATCCACAAGCCGGCGGGATGCCTC
CAGCACCACAACAAAGACAACCAGGTTATACGACCCCTGCATCGCAGCATCCCGCTGGAA
TGCCGAACTCTGGCCAATACAATTATGGTATGCGCGCTCCAACTCCGACTAACCCGAATC
CAATGCCTCCGTCACAGTCTACTGTAGCATCATCCCAGCCTTACGGAATGGCACCAACAA
GCTCCGCTGCAATGCCATACTCTGCTGGAGGACCTCCTCAACAAATGCAGTCGTACGGGG
CGGCCTCCACCCCGCCTCCATCAATGTCGTACCCTCCTGGAGCACCCGGCGGATCGTATG
GTCAACCGCCGACAAATCCTCACAGGCTTATTAGGGGAGGTGGAGCATACAGAGCCAGAC
AGCCGGGTCCCGGCTATCAATAAC

InterProScan

SMART
PB1_dom (IPR000270) - T[6-89] 2.6E-16
ProSiteProfiles
PB1_dom (IPR000270) - T[6-89] 22.172
CDD
PB1_TFG (IPR034857) - T[7-85] 3.37133E-39
Pfam
PB1_dom (IPR000270) - T[9-87] 8.5E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value