- Transcript 'Moocul.CG.ELv1_2.S11...' >
- EST 'AHC0AAA266YM17_RM1' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.C2.821.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr1.g49780.01.t
Possible name(s)
TUBA3C; TUBA3D; TUBA3E
Gene model
Location
chr1 [4,296,787 / 4,297,925]
Amino acid sequence
Length: 311
>Boschl.CG.Botznik2013.chr1.g49780.01.p
MPSDKSIGSSEDSFNTFFSETGNGKHVPRAIFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTVGKEMIDQVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAVYPAPQVSTAVVEXYNSILTTHXTLEHSDCAFMXDNEAIYXICRR
NXDIDRPSYTNLNRXIGQIVXSITASXRFXGALNVDLTEXQTNLVPYPRIHFXLVTYAPI
ISAEKAYHEQLSVSEITNACFEPCNQMVKCDPRHGKYMXCCMLYRXDVVPKXVNAAXAAI
KTKXSIQVQXL
Nucleotide sequence
Length: 936
>Boschl.CG.Botznik2013.chr1.g49780.01.t
GATGCCAAGCGACAAGTCGATCGGATCGTCGGAGGACTCTTTCAATACTTTCTTCAGCGA
AACCGGCAATGGCAAGCATGTACCGCGGGCGATCTTTGTCGACCTAGAGCCCACGGTAGT
CGACGAGGTGAGGACCGGCACCTACCGACAGCTTTTCCACCCGGAACAACTGATCACCGG
CAAGGAAGACGCTGCCAATAATTACGCACGCGGACATTACACCGTAGGGAAAGAGATGAT
TGATCAAGTGCTAGATCGCGTGCGCAAACTAGCCGATCAATGCACCGGTCTCCAAGGCTT
TTTGATTTTTCATTCCTTCGGTGGCGGTACCGGATCCGGATTCGCGTCGCTGCTTATGGA
ACGACTTTCTGTGGACTACGGGAAGAAATCTAAATTGGAATTCGCCGTGTACCCGGCGCC
GCAGGTTTCTACAGCTGTAGTAGAGCCNTACAATTCCATCCTCACCACCCACACNACGCT
CGAACATTCGGACTGCGCTTTCATGGTNGACAACGAAGCGATATACGANATCTGCCGTCG
CAATTTNGACATCGACCGTCCAAGCTACACCAATCTCAACCGTNTGATCGGACAGATCGT
CTCNTCCATCACCGCGTCCNTGCGATTCGANGGAGCGCTGAATGTTGATCTCACAGAGTT
NCAGACTAATCTTGTACCGTACCCGCGCATTCACTTCCCNCTGGTGACCTACGCGCCGAT
CATCTCCGCGGAGAAGGCATACCACGAGCAGCTCTCCGTTTCGGAGATCACGAACGCCTG
CTTCGAGCCCTGTAATCAGATGGTGAAGTGCGATCCGCGTCATGGAAAGTACATGGCNTG
CTGCATGCTGTACAGAGGNGACGTGGTGCCGAAAGANGTGAACGCAGCGATNGCCGCTAT
CAAGACCAAGCGNTCGATTCAGGTACAATNNCTATG
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[1-233] 6.7E-105 |
| PANTHER |
Tubulin (IPR000217) - T[1-308] 2.9E-194 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[5-209] 1.1E-79 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[6-178] 2.4E-53 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[10-23] 7.6E-58 - T[53-66] 7.6E-58 - T[85-93] 7.6E-58 - T[113-125] 7.6E-58 - T[126-137] 7.6E-58 - T[179-191] 7.6E-58 - T[239-254] 7.6E-58 - T[286-307] 7.6E-58 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[14-211] 5.5E-76 |
| PRINTS |
Tubulin (IPR000217) - T[18-37] 1.9E-62 - T[60-71] 1.9E-62 - T[73-97] 1.9E-62 - T[99-117] 1.9E-62 - T[118-139] 1.9E-62 - T[143-156] 1.9E-62 - T[157-177] 1.9E-62 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[107-113] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[211-307] 6.1E-33 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[213-311] 1.6E-8 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[228-307] 2.0E-26 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[234-310] 2.1E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 87.948 % | 546 | 0 |
| TBA3D_HUMAN | 87.948 % | 546 | 0 |
| TBA3E_HUMAN | 87.296 % | 542 | 0 |