- Clone 'cien45718' >
- EST 'ma157e13' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr1.g50153.01.t
Possible name(s)
SCFD1; STXBP1; VPS45
Gene model
Location
chr1 [4,398,411 / 4,406,028]
Amino acid sequence
Length: 643
>Boschl.CG.Botznik2013.chr1.g50153.01.p
MAMSIRERQSVAVKRMLHFGNPITKLSTMEPDWKVLIYDRFGQDIISPLLSVSELRELGV
TLYLPLHSDRDSVPDVSAIYFILPTDENISRMCRDMQNELYDGYYFNFISAIPRNKLEDL
ASAAVLANSEMYVTKVFDQYLNFISLEENMFLLQNQNREAVSYYSINRTGVKDTDMMSII
DTIADGLYCVFVCLGAIPIIRCPRGNAAEMVAEKLEKKLRENIRDARNSFFSATPSSSAM
GQSPGGQFSFQRPLLVILDRNVDLATPLHHTWTYQALIHDVLDLNLNSVTVTETPAEDAV
GGARPKRKKAQTFNLAPVDKFWQKYKGNPFPEVAEAVQSEIVEYKGHEEEVQRLKAAMGL
AGGDEGPVDISDNTAKLTSAVNTLPELLEKKRLIDMHTTIATTILDYIKARKLDEYFEME
EKLMSKASIDKSLMDFISDPDAGTPDDKLRLFLIYYICQSQSTQPITDQEVDQYAQALEA
ANCRLEPLKYIKRWRQYVMMNSSAPQQQYRGGGTKTIGMFSHLVSTGSQFVMEGVKNLVV
KKHNLPVTRTVDALMEMKSSAEVDSFRYFDPKLARSVDNAARNKVPYSEAIVFVVGGGNY
IEYQNLMDYVKGKQGKKISYGCSELFNATQFLKQLSHLGSEIS
Nucleotide sequence
Length: 1,932
>Boschl.CG.Botznik2013.chr1.g50153.01.t
TGGCTATGTCGATAAGAGAACGGCAATCAGGTGCCGTGAAGAGAATGCTACATTTCGGCA
ATCCGATTACAAAACTATCGACTATGGAACCGGACTGGAAGGTTTTGATATATGACAGAT
TTGGGCAAGATATAATTTCACCGCTCTTGTCCGTTAGCGAGCTTCGGGAACTGGGAGTTA
CTTTGTATCTGCCTCTTCATAGCGACCGTGATTCCGTTCCTGACGTTTCCGCAATCTACT
TCATTTTACCAACAGATGAGAACATCTCTCGAATGTGCCGGGACATGCAAAATGAATTAT
ATGATGGCTACTACTTCAATTTTATCTCTGCCATTCCGAGAAACAAATTAGAAGATTTGG
CAAGTGCGGCTGTGTTGGCAAACTCAGAAATGTACGTCACGAAAGTATTCGACCAATATT
TGAATTTCATCAGTTTAGAAGAAAATATGTTCTTGTTGCAAAATCAAAATAGAGAAGCTG
TTTCGTACTACAGCATAAACAGAACCGGTGTAAAAGACACTGACATGATGTCAATTATAG
ATACAATTGCCGATGGATTATATTGTGTTTTCGTTTGTCTTGGAGCTATTCCGATTATCA
GGTGTCCGCGCGGAAATGCAGCAGAGATGGTTGCCGAAAAACTCGAGAAAAAATTGAGGG
AAAACATCCGCGACGCCCGAAACAGTTTTTTTTCCGCAACCCCCTCGAGTTCCGCAATGG
GGCAATCGCCCGGCGGACAATTTTCCTTTCAAAGGCCACTGCTGGTTATTTTAGATAGGA
ATGTCGACTTGGCCACTCCGCTGCATCACACGTGGACTTACCAGGCGCTTATCCACGATG
TTTTGGATCTGAACTTGAACAGCGTTACCGTGACGGAGACGCCGGCGGAAGATGCGGTCG
GCGGGGCGCGACCAAAAAGAAAAAAGGCCCAGACCTTCAATCTTGCTCCCGTGGATAAGT
TCTGGCAGAAATATAAAGGCAACCCGTTTCCGGAAGTGGCCGAAGCGGTACAAAGTGAAA
TTGTCGAGTACAAGGGCCACGAAGAGGAAGTGCAACGTTTAAAAGCTGCCATGGGCCTGG
CCGGGGGAGATGAAGGTCCGGTTGATATATCCGACAACACTGCTAAGCTGACGTCTGCAG
TAAAGACCCTTCCGGAACTTTTGGAAAAGAAGCGTCTCATTGACATGCACACAACTATCG
CAACAACTATTCTCGATTACATCAAGGCGAGGAAACTTGATGAATACTTTGAAATGGAAG
AGAAGTTGATGAGTAAAGCCAGCATCGATAAATCACTGATGGATTTTATTTCTGATCCAG
ACGGCGGTACACCAGACGATAAACTTCGGCTGTTTCTGATCTATTACATCTGCCAATCTC
AATCGACGCAGCCCATCACGGACCAAGAAGTGGATCAGTACGCGCAAGCTTTGGAGGCCG
CTAATTGCCGGTTGGAGCCGTTGAAATATATTAAAAGATGGAGGCAATATGTTATGATGA
ATTCAAGTGCTCCACAACAACAATACCGTGGCGGTGGTACAAAGACAATAGGGATGTTCT
CTCATCTGGTCAGTACTGGCTCACAATTTGTTATGGAAGGAGTGAAGAATTTAGTCGTGA
AGAAGCACGATCTCCCTGTTACAAGAACCGTGGATGCTCTGATGGAAATGAAGTCATCTG
CCGAGGTTGACAGTTTCAGATATTTCGATCCAAAGCTTGCCAGATCTGTCGACAATGCCG
CCAGAAATAAAGTACCTTACTCTGAGGCCATCGTTTTTGTCGTTGGTGGTGGGAACTACA
TCGAATATCAGAATTTAATGGATTATGTTAAAGGTAAGCAAGGAAAAAAGATATCATATG
GCTGCAGCGAGTTGTTCAACGCCACCCAGTTTCTGAAACAGGTTTCTCATCTGGGATCGG
AAATATCTTAGA
| SUPERFAMILY |
Sec1-like_sf (IPR036045) - T[1-641] 1.96E-153 |
| PANTHER |
Sec1-like (IPR001619) - T[2-639] 3.2E-248 |
| PIRSF |
Sec1-like (IPR001619) - T[3-643] 1.5E-59 |
| Pfam |
Sec1-like (IPR001619) - T[34-634] 8.0E-123 |
| Gene3D |
Sec-1-like_dom2 (IPR027482) - T[146-228] 2.1E-135 - T[251-270] 2.1E-135 - T[546-638] 2.1E-135 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS45_HUMAN | 21.613 % | 99.4 | 9.89E-22 |
| SCFD1_HUMAN | 64.743 % | 860 | 0 |