- EST 'AHC0AAA226YN11_RM1' >
- Clone 'cima821211' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr1.g56325.01.t
Possible name(s)
GTF3C3; OGT
Gene model
Location
chr1 [3,568,534 / 3,575,404]
Amino acid sequence
Length: 504
>Boschl.CG.Botznik2013.chr1.g56325.01.p
MDEIACKYPDDVKYEDVNVMCELAMLSKQYRKVYDIVAKHCQTQVEYAADDLSNPGDLQL
DVADIFMETKQYQMAVHVLDILAKSRDYSLAAVWLKKGECHRELGQRADETFCIRQVVEK
APGHAKGYLLLCQVLRHTKRYKEAIEVIQDAETYELEDEEQMLLNYETFKMYNEWAAASK
RRHDKLCKSADLGLLMLANKLEDTFIYTKTILLRRANREDGVYRGDVRATRKVGKYFYKH
EDKKSLVAKGRADVISNEDWWKIFLETCGILRETERFIDGITLIEVALSHGQWCNLPEKK
LFLQRMACSMSVLGGNYFFAYTYMRAWLLDDSSRNCLWNLFNQITVRSEDQRHHRFCLRF
LIKDPESIALAVLTGHNSLATGTYKHSLGEYMRAHRKTPTNPLYTLLIGIIYIHIASQRF
TTHKSTLVMQSIAFLNMYLKQRKCDQEAYYNIGRVYHQIGLSQFATQWYRKALETRPPKC
DIEESVIDLKSEIAYNLAILYRYA
Nucleotide sequence
Length: 1,515
>Boschl.CG.Botznik2013.chr1.g56325.01.t
TGGACGAGATCGCGTGCAAATATCCCGATGACGTGAAGTACGAAGATGTGAACGTTATGT
GCGAGCTGGCGATGCTGTCGAAGCAGTATCGGAAAGTTTACGACGTTGTAGCGAAACATT
GCCAGACGCAAGTGGAATATGCTGCCGACGACCTGAGTAACCCAGGTGACCTGCAACTAG
ACGTGGCCGACATCTTCATGGAGACGAAGCAGTATCAAATGGCGGTGCACGTGCTGGACA
TTCTGGCCAAGTCCCGGGACTACTCGCTGGCGGCGGTGTGGCTGAAAAAGGGCGAGTGCC
ACCGGGAGCTGGGCCAGCGCGCGGACGAGACTTTCTGCATCAGGCAGGTCGTGGAGAAGG
CGCCGGGGCACGCGAAAGGGTATCTGCTGCTGTGCCAAGTGCTGCGTCATACCAAACGGT
ATAAAGAAGCTATCGAGGTGATACAAGACGCCGAGACCTATGAGCTGGAAGACGAGGAGC
AGATGTTGCTGAATTACGAAACCTTCAAGATGTACAACGAATGGGCGGCGGCGTCGAAAA
GAAGGCACGACAAGCTGTGCAAGTCTGCCGACTTGGGGTTGCTGATGCTCGCGAACAAAT
TGGAAGACACTTTTATATACACGAAGGCTATTCTGTTGCGGAGGGCGAATCGGGAAGACG
GGGTGTATCGCGGTGACGTTCGCGCAACGAGAAAAGTCGGTAAATACTTCTACAAGCACG
AAGACAAGAAGTCTCTTGTCGCTAAAGGCCGTGCCGACGTGATCAGCAACGAAGATTGGT
GGAAGATTTTCCTGGAAACTTGCGGAATCCTACGCGAAACAGAACGCTTTATAGATGGGA
TCACATTGATCGAAGTGGCGCTATCGCACGGGCAGTGGTGTAATTTACCGGAGAAGAAGT
TGTTCTTGCAGAGAATGGCTTGTTCGATGAGCGTGTTAGGAGGGAATTACTTTTTTGCGT
ACACCTACATGAGGGCGTGGCTATTGGACGACTCGTCGCGAAACTGCCTGTGGAACTTGT
TCAATCAGATCACTGTCAGGTCCGAGGACCAGCGACATCACCGGTTTTGCTTGCGGTTTC
TCATCAAGGACCCGGAAAGTATCGCGCTCGCCGTTCTCACCGGCCATAATTCGCTGGCCA
CTGGAACGTACAAACACTCGTTGGGAGAATACATGCGGGCGCACAGAAAGGCTCCTACCA
ATCCGCTGTACACGCTTCTCATCGGCATCATATACATACACATAGCGTCGCAACGATTCA
CCACACACAAAAGCACTCTGGTAATGCAATCGATCGCATTCCTGAATATGTATTTGAAGG
AAAGAAAATGCGACCAGGAAGCTTACTACAACATTGGCCGCGTGTACCACCAGATCGGGC
TGAGCCAGTTTGCGACGCAGTGGTACAGAAAGGCGCTCGAGACCCGGCCTCCGAAATGCG
ATATCGAAGAGAGCGTCATCGACTTGAAGTCGGAAATAGCGTACAATCTTGCGATCCTGT
ACAGGTATGCGTGAT
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[15-189] 1.6E-11 - T[351-504] 3.8E-10 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[60-149] 6.91E-18 - T[359-478] 6.91E-18 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[91-124] 5.104 - T[125-158] 5.517 - T[368-401] 5.015 - T[446-479] 10.325 |
| SMART |
TPR_repeat (IPR019734) - T[91-124] 12.0 - T[125-158] 120.0 - T[446-479] 9.6 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[91-158] 8.856 - T[446-479] 10.642 |
| Pfam |
TPR_repeat (IPR019734) - T[447-477] 0.0018 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TF3C3_HUMAN | 31.985 % | 260 | 9.29E-78 |