- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr2.g02609.01.t
Possible name(s)
CTDP1; MCPH1
Gene model
Location
chr2 [5,786,553 / 5,788,053]
Amino acid sequence
Length: 499
>Boschl.CG.Botznik2013.chr2.g02609.01.p
MVCIIDDRDDVWNGVPNLIVVRKYNYFQGAGDINNPFRDKKSSQATDMRRKRKSDENIDD
QKGCKDAKVEIDVKESKSEDSKSDVDEDLDMSSDSESSSDSSSESGGSSDSKSADNGTPA
STDQVQPTNGAGADADQTSSAETVPISSQDESTQGSQDLLNREITGFSDLSQEFSSQNDR
KTDSDDYLQFLRDILVQIHDTYYAAYDKFLKKEFDNLPDVRGVVPFLRSKVLYGQTIVFT
GVIPQSFQGPPIRHRAYIVATQLGAKIEEQITDRTTHLVASKRGTKKYQDAEKRKGIRIV
SLDWLWCCSERWERVEEKLFPVPTSTVEPLSSAVKDDKIGKGMFCDSKAYDPATGKLIRK
MQDPRFNFMVAESKQRKQDQVALYSSLQVPDAVIPIKGSPARKPLVKSKSASVRSRKRSM
AEIMGYQYSLSTDDIADMDREVDDLLDSSDEEQLNQDRQDKAIATAKTSSSSEDSGGSDD
DEMEALLNAEMHFTEAEQS
Nucleotide sequence
Length: 1,500
>Boschl.CG.Botznik2013.chr2.g02609.01.t
AATGGTTTGCATCATCGACGACCGTGACGACGTTTGGAACGGTGTCCCGAATCTCATTGT
CGTCCGTAAATACAACTATTTCCAAGGGGCTGGCGATATCAATAATCCTTTTCGTGACAA
AAAAAGCAGTCAAGCCACCGATATGCGGAGAAAACGCAAGTCCGATGAGAATATCGATGA
TCAGAAAGGATGCAAGGATGCAAAAGTGGAAATCGATGTTAAAGAATCCAAGTCGGAAGA
CTCGAAATCCGACGTAGATGAAGACCTCGACATGTCGTCAGATTCCGAGTCCAGTTCCGA
TTCGTCCTCTGAATCAGGGGGTAGTTCCGACTCGAAATCTGCCGATAATGGCACTCCCGC
TTCTACCGATCAAGTCCAACCGACAAACGGTGCCGGAGCAGACGCAGACCAGACGTCTTC
TGCGGAAACTGTTCCCATTTCCTCCCAAGACGAGTCGACGCAAGGTTCTCAGGATTTACT
AAACCGCGAGATTACCGGATTTAGCGACCTCAGCCAGGAATTTTCGTCCCAGAACGACAG
GAAGACAGATTCCGACGATTACTTGCAGTTTTTGAGAGACATTCTCGTGCAAATTCACGA
CACGTATTACGCGGCCTACGATAAATTTTTGAAGAAAGAATTCGACAACCTACCCGACGT
ACGCGGCGTCGTCCCGTTCTTACGCAGTAAAGTGCTGTACGGACAAACCATTGTTTTTAC
GGGTGTTATCCCGCAGAGTTTCCAAGGACCCCCGATTCGCCATCGAGCTTACATAGTCGC
TACCCAACTCGGGGCTAAAATCGAGGAGCAAATCACCGATCGAACGACACACTTGGTAGC
GTCAAAAAGAGGCACGAAAAAGTATCAAGACGCCGAGAAACGTAAAGGTATTCGTATTGT
GTCTCTGGACTGGTTGTGGTGCTGTTCGGAACGGTGGGAGCGTGTCGAGGAAAAATTATT
TCCCGTGCCGACATCTACCGTCGAACCTCTGAGTTCTGCCGTTAAAGACGACAAAATCGG
TAAAGGTATGTTCTGCGATTCCAAAGCTTATGACCCGGCGACAGGTAAGCTAATCCGTAA
AATGCAAGATCCACGTTTTAACTTCATGGTGGCCGAATCCAAGCAAAGAAAACAAGATCA
GGTCGCTTTGTACTCGTCACTTCAAGTGCCGGACGCCGTCATCCCGATCAAAGGCAGCCC
TGCACGGAAGCCTCTCGTTAAGAGCAAATCTGCTTCCGTTCGAAGTCGAAAACGTAGCAT
GGCCGAAATCATGGGCTACCAATATTCGTTGTCCACCGATGACATCGCAGACATGGACAG
GGAAGTCGATGATCTCCTGGACAGCAGTGATGAAGAGCAGCTCAATCAAGATCGTCAAGA
TAAAGCAATCGCAACCGCGAAAACAAGTTCTAGCTCTGAGGACTCCGGAGGCTCTGACGA
TGATGAGATGGAGGCGCTACTAAATGCAGAGATGCATTTCACAGAGGCCGAGCAATCCTG
| ProSiteProfiles |
BRCT_dom (IPR001357) - T[227-322] 16.289 |
| SUPERFAMILY |
BRCT_dom_sf (IPR036420) - T[229-323] 5.96E-16 |
| SMART |
BRCT_dom (IPR001357) - T[229-312] 1.7E-7 |
| Gene3D |
BRCT_dom_sf (IPR036420) - T[231-322] 2.2E-24 |
| CDD |
BRCT_dom (IPR001357) - T[234-306] 3.94958E-10 |
| Pfam |
BRCT_dom (IPR001357) - T[253-304] 8.3E-10 |
| Pfam |
FCP1_C (IPR015388) - T[348-459] 1.7E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CTDP1_HUMAN | 32.845 % | 154 | 6.96E-40 |