Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr2.g19071.01.t

Possible name(s)

DDRGK1

Gene model

Boschl.CG.Botznik2013.chr2.g19071

Location

chr2 [7,074,511 / 7,076,035]

Sequences

Amino acid sequence

Length: 275

>Boschl.CG.Botznik2013.chr2.g19071.01.p
MDPILYVAAAVIVSLLLWFAIRSKTGEKPDAGNDTRDQPQPRQAGRVPVRRRNVLSRIQQ
RAQENQLNDQDSDDEDADSKKIGAKKRKKLEEKEERRKMREIEMREREERKREQEERDET
RRLEDERKLKEEAKIAEEKRVELEEKERREHEEYLKLKAMFSVEEEGDEAINTEDGGENM
LLQFVEFVKSKKVVLLEDLASHFGLRTQEAIDRVQTMLNDEILTGVVDDRGKFIYISNDE
LNAVAKFVKQRGRVSISDLAQASNSLVNLISESAT

Nucleotide sequence

Length: 828

>Boschl.CG.Botznik2013.chr2.g19071.01.t
TGGATCCAATCTTGTATGTTGCTGCGGCAGTCATTGTTTCTCTGCTTCTTTGGTTTGCCA
TACGATCTAAGACTGGTGAAAAGCCGGATGCTGGTAACGACACAAGAGATCAACCCCAAC
CACGTCAGGCAGGTCGTGTACCAGTGCGCCGAAGAAATGTTCTGTCGCGGATACAGCAAC
GTGCCCAAGGAAATCAACTCAATGACCAAGATTCCGATGACGAGGATGCAGATAGCAAAA
AGATAGGCGCGAAGAAAAGGAAGAAACTGGAGGAGAAAGAAGAGCGGAGGAAAATGAGAG
AGATAGAGATGAGGGAACGGGAGGAGCGAAAAAGGGAACAGGAAGAGAGAGATGAAACGA
GGCGTCTCGAGGATGAGAGAAAATTAAAGGAAGAGGCGAAAATTGCTGAGGAAAAACGTG
TTGAACTCGAAGAAAAAGAGAGACGTGAACATGAGGAATATCTCAAGCTGAAAGCCATGT
TCTCAGTGGAGGAGGAAGGGGATGAAGCCATAAATACCGAAGATGGAGGCGAGAATATGC
TACTGCAATTTGTCGAGTTTGTCAAATCGAAAAAGGTTGTCCTTCTGGAGGACCTGGCTT
CTCATTTTGGGTTGCGGACGCAAGAGGCCATCGACAGGGTGCAGACGATGTTGAACGACG
AGATTTTAACGGGAGTCGTCGACGACAGGGGGAAGTTTATATATATATCGAACGACGAAC
TGAATGCGGTCGCAAAATTTGTTAAGCAACGCGGACGGGTGTCTATAAGCGACTTGGCGC
AGGCCAGTAATTCATTAGTGAATTTGATTTCGGAAAGTGCAACCTGAA

InterProScan

SMART	DDRGK_dom-contain (IPR019153) - T[80-268] 1.0E-88
Pfam	DDRGK_dom-contain (IPR019153) - T[80-268] 1.4E-60
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[174-244] 1.09E-22
Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[179-236] 5.4E-26

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DDRGK_HUMAN	44.373 %	165	1.66E-49