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- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr2.g23688.01.t
Possible name(s)
FNTA; PTAR1; RABGGTA
Gene model
Location
chr2 [7,561,116 / 7,562,784]
Amino acid sequence
Length: 555
>Boschl.CG.Botznik2013.chr2.g23688.01.p
MHGRIKVKTTAEQDEERRKEQERKLKLFQKASSIAFYKIGNKEYDDAGLTVTAELLYKNS
DISSLWNYRKRAILAMKDEFAENHQKLWENELELLVACLRNNPKSYGCWHHRCFIMLTMP
TPTWEDELKLCNQFLQFDDRNFHCWDYRRFVVKHSVPEVPIDEELKVTNHLIENNFSNYS
SWHYRSKLLPKRFPSLKYSEQIEERKLLEELEYVQNAFFTDPNDQSAWFYHQWLVGRGEE
NQILISAHFSRESNAVTCVFRKPSSRNSVESNCSISVGSAIAKGIWKPVVDGFVKYCHAW
LFKLSDDVPIEDFSIRLHCFDVKVELDIGCELMFANAAFFTNNEFRQTLGETKSALIKTE
LNSCIELNELEPGNKWIVLTLVQLMNIIDPDKYREDINKHVSELKSIDSSRRNYFADLRS
KIVIEQNISAGKLENGNVNLSDFGITRMYHVQYFSCVKILNLSENSLTSLCGPLYLLRCC
EQFWADDNEIDDVTGICDMPSLSLLSLKGNRLVDVGCLKTIASCHVLKTVDIRQNPLECS
EADVMRLLPDVKVSV
Nucleotide sequence
Length: 1,668
>Boschl.CG.Botznik2013.chr2.g23688.01.t
TGCACGGTAGAATTAAAGTAAAGACTACTGCCGAACAGGACGAGGAGAGACGCAAGGAAC
AAGAAAGGAAGTTGAAGCTTTTCCAGAAAGCATCTAGTATTGCGTTTTACAAGATCGGAA
ATAAAGAATATGACGATGCCGGCTTGACGGTTACCGCTGAGCTACTATACAAAAATTCAG
ACATATCATCATTGTGGAATTACAGAAAACGCGCAATACTTGCCATGAAGGATGAATTCG
CAGAAAATCATCAAAAATTATGGGAAAACGAGTTGGAACTATTGGTGGCATGCCTGAGAA
ATAACCCAAAGTCGTATGGTTGCTGGCATCACAGATGTTTCATTATGCTCACCATGCCAA
CCCCAACGTGGGAAGATGAATTGAAATTATGCAACCAGTTCCTCCAGTTTGACGATAGGA
ATTTCCACTGTTGGGACTACAGACGATTCGTGGTGAAGCATTCAGTCCCTGAAGTCCCGA
TCGATGAAGAGCTCAAAGTGACGAATCATTTGATAGAAAATAACTTCTCGAATTACTCGT
CGTGGCATTATCGTAGCAAGCTACTGCCCAAACGATTTCCAAGCTTGAAATATTCTGAAC
AAATCGAAGAACGGAAGTTATTGGAGGAATTGGAGTATGTTCAAAATGCATTTTTTACCG
ACCCCAATGATCAAAGTGCATGGTTTTACCATCAATGGTTGGTTGGGCGTGGGGAAGAGA
ACCAAATATTGATTTCGGCACATTTCAGCCGTGAATCTAACGCAGTGACGTGCGTTTTCA
GGAAGCCATCTTCGCGAAATTCAGTTGAATCCAACTGCAGTATAAGTGTTGGAAGTGCTA
TCGCGAAAGGTATATGGAAACCTGTTGTGGACGGATTTGTGAAATATTGTCATGCTTGGC
TTTTCAAGTTATCCGACGATGTACCGATAGAAGATTTTTCTATTAGACTCCATTGTTTTG
ACGTAAAAGTGGAGCTTGACATAGGCTGTGAATTAATGTTCGCAAATGCTGCCTTTTTCA
CCAACAATGAATTTCGCCAGACCCTGGGCGAAACAAAATCGGCGCTCATTAAAACGGAAT
TAAACTCTTGTATCGAATTGAACGAATTAGAACCGGGTAACAAGTGGATTGTCCTCACGT
TGGTACAGCTGATGAATATCATCGATCCTGACAAGTACCGAGAAGATATCAACAAGCACG
TTTCCGAATTAAAAAGCATCGATTCGTCCCGAAGAAATTATTTCGCCGACTTGAGAAGCA
AGATAGTGATCGAACAAAATATTTCAGCTGGCAAGCTGGAGAATGGTAATGTGAATTTAT
CCGATTTCGGTATCACGCGGATGTACCATGTGCAGTATTTTTCATGTGTAAAAATTCTCA
ACTTGTCCGAAAACAGTTTGACATCCCTGTGCGGTCCGTTGTATCTTCTGCGGTGCTGTG
AGCAATTCTGGGCTGATGACAATGAAATTGATGATGTCACAGGAATTTGTGATATGCCGA
GTCTTTCGTTGTTATCACTCAAAGGGAATAGGCTAGTTGATGTGGGCTGTTTGAAGACCA
TTGCATCTTGTCATGTGCTCAAAACTGTTGACATAAGACAGAATCCGTTAGAGTGCTCCG
AGGCAGATGTAATGAGATTGCTGCCGGATGTAAAGGTCTCTGTGTAAA
| PANTHER |
RabGGTase_alpha (IPR032955) - T[1-425] 7.3E-101 |
| ProSiteProfiles |
Prenyl_trans_a (IPR002088) - T[44-78] 8.283 - T[87-121] 15.639 - T[123-157] 15.187 - T[160-194] 15.586 - T[206-240] 14.391 |
| Pfam |
Prenyl_trans_a (IPR002088) - T[91-116] 7.0E-7 - T[127-154] 9.2E-8 - T[164-190] 2.1E-8 - T[210-236] 1.1E-8 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[431-554] 1.1E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PGTA_HUMAN | 40.317 % | 393 | 6.25E-131 |