- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr2.g67254.01.t
Possible name(s)
TRIM54; TRIM55; TRIM63
Gene model
Location
chr2 [622,700 / 628,891]
>Boschl.CG.Botznik2013.chr2.g67254.01.p
METLRMLSKTPGSSDYEAEVERLLSCPICLEVYSKPVVILPCQHNLCRKCANDVFQNRGT
PMGSGGRFRCPTCRYEVMLDRHGVYGLQRNILVENIIDMYQTESKKPFRKAEVLMCDEHE
EEKVNIFCISCQKPTCSLCKVFGQHRDCTVLTMDKVYKDHKSELSSAISMLVAGNDRLQT
VISSTEQTAVMVEENSKKAQNEVSSSFDQLYAVLEQRKQAMLSQIKAASQEKSEILQSML
SEYGIQIQASSKLVEEALTMLEEPSHSQFLLISRDLINRVTSTARDAEVPKPPQHIQNVD
EFSINLTEYVDRLKQIKFESDDTDYSDISSTLRKESNRAVGGENVGDVFQAKLLLNEAGN
AEEAVAAARVTKTDNDEDDDVPSTSTAFKSDREGDRKESYGAVLLYRQSLLRSLLERRRS
SHNSSEDVDSDGKETLKSLLKQKSLSSHCTEDVVGDVNHPKDFARITNHEPSSPRQRKVL
RFHTDAQSSVDSDISAPEHSTTTARRPSKRRQRSLYTSHRRRTWSHLLDKKP
>Boschl.CG.Botznik2013.chr2.g67254.01.t
TGGAAACCTTAAGAATGTTATCGAAAACACCGGGGAGTAGCGACTATGAAGCAGAAGTTG
AGCGGTTACTAAGTTGCCCCATTTGCCTGGAAGTGTACAGCAAGCCTGTTGTTATTTTAC
CTTGCCAACACAACTTATGTAGGAAATGCGCCAATGATGTCTTCCAAAACAGGGGAACAC
CCATGGGCTCGGGAGGACGATTCAGGTGCCCGACGTGTAGATATGAAGTCATGCTGGATA
GACATGGAGTTTACGGTTTGCAAAGAAATATCCTTGTGGAAAATATCATCGACATGTACC
AAACAGAAAGCAAAAAGCCCTTCCGAAAGGCTGAGGTTCTCATGTGCGACGAACACGAGG
AGGAAAAGGTCAATATTTTCTGTATCTCTTGCCAAAAACCCACCTGTTCCCTCTGCAAAG
TATTCGGCCAGCATCGCGACTGTACTGTATTAACGATGGACAAAGTCTACAAAGATCATA
AAGCCGAGTTGAGTAGCGCTATATCCATGCTGGTTGCCGGCAACGATCGCCTTCAAACAG
TGATATCATCTACAGAGCAAACCGCAGTAATGGTCGAGGAGAACAGTAAAAAAGCCCAGA
ATGAAGTCTCAAGCTCTTTCGATCAACTGTATGCCGTATTAGAACAACGAAAGCAAGCCA
TGCTCAGTCAAATAAAGGCCGCATCACAGGAAAAATCCGAGGTACTCCAGTCAATGTTAT
CAGAATACGGCATCCAAATACAAGCATCCAGTAAACTTGTGGAAGAGGCATTAACGATGC
TGGAAGAGCCGTCCCATTCTCAATTTCTCTTGATTAGTAGAGATTTGATCAACAGGGTTA
CTAGTACTGCTCGTGATGCGGAGGTCCCGAAACCACCACAGCATATTCAAAACGTAGACG
AATTCTCAATCAATTTGACGGAATACGTGGACCGTCTCAAACAAATCAAGTTCGAGAGCG
ATGGTACGGATTATTCTGATATATCATCAACCCTGCGCAAAGAGAGTAATAGAGCGGTGG
GTGGTGAAAACGTGGGTGATGTATTTCAAGCAAAATTGCTGCTGAACGAGGCAGGGAACG
CGGAAGAAGCAGTAGCAGCGGCAAGGGTCACAAAAACCGACAACGACGAAGACGATGACG
TGCCTTCCACCTCCACTGCTTTCAAGTCTGATAGAGAAGGCGATCGCAAAGAATCATACG
GCGGGGTTTTGTTGTACCGACAGAGTCTACTGCGGTCATTGCTGGAGAGACGACGAAGTT
CCCACAATAGTAGTGAGGATGTCGATTCCGACGGCAAGGAAACTTTAAAATCTTTGCTCA
AGCAAAAGTCTCTATCCTCGCACTGTACGGAGGACGTTGTCGGCGACGTAAATCATCCGA
AGGATTTCGCGCGGATAACGAACCACGAGCCTTCCTCGCCCCGACAACGTAAAGTTCTGC
GATTCCACACAGACGCTCAATCTTCAGTCGACAGTGACATTTCCGCGCCAGAGCACTCTA
CAACGACTGCTCGGCGCCCATCAAAGAGGCGGCAGCGATCATTATACACTTCGCATCGAC
GAAGGACTTGGTCGCACCTTCTGGACAAAAAGCCCTAAT
Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[3-103] 2.9E-19 |
ProSiteProfiles |
Znf_RING (IPR001841) - T[26-74] 12.401 |
Pfam |
Znf-RING_LisH (IPR027370) - T[26-71] 2.1E-10 |
SMART |
Znf_RING (IPR001841) - T[26-73] 8.2E-9 |
ProSitePatterns |
Znf_RING_CS (IPR017907) - T[42-51] . |
ProSiteProfiles |
Znf_B-box (IPR000315) - T[111-153] 11.277 |
SMART |
Znf_B-box (IPR000315) - T[111-153] 9.1E-5 |
Pfam |
Znf_B-box (IPR000315) - T[113-146] 6.0E-6 |
CDD |
Znf_B-box (IPR000315) - T[115-153] 6.74658E-6 |
ProSiteProfiles |
COS_domain (IPR017903) - T[261-319] 12.986 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
TRI54_HUMAN | 50.645 % | 329 | 3.26E-109 |
TRI63_HUMAN | 48.232 % | 328 | 8.52E-109 |
TRI55_HUMAN | 47.231 % | 318 | 2.0E-102 |