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TRANSCRIPT CARD

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  1. Clone 'cinc030b06' > 
  2. Transcript 'KH2012:KH.C11.22.v3....' > 
  3. Clone 'cscl002k11' > 
  4. Clone 'cien128596' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr3.g10663.01.t

Possible name(s)

CDK12; CDK13; CDK9

Gene model

Boschl.CG.Botznik2013.chr3.g10663

Location

chr3 [1,642,401 / 1,644,693]

Sequences

Amino acid sequence

Length: 380

>Boschl.CG.Botznik2013.chr3.g10663.01.p
MTNKKDITLVDFPLCHDVAKYERITKIGQGTFGEVFKAKDKNTGRLVALKKVIMENEKEG
FPITALREIKILQQLKHESIVDLIEICRAKPTQYNRQKGSIYLVFELCDHDLAGLLSNAT
VKFTLGEIKKIMQQLLDGLFYIHRNKILHRDMKAANILITKTGTLKLADFGLARAFSYTK
AGQANRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGDTEQTQL
KLICQLCGSITPQVWPTVGKYDLYSKFELPKGQKRRVKERLKGYVKDQYALDLIDKLLCL
DPKHRIDSDEALNHDFFWTEPLPNDLTKMLSQHKTSMFEYLAPPRRVGAHPHARNNARQH
APTAAAARQQPTDPSYDRIF

Nucleotide sequence

Length: 1,143

>Boschl.CG.Botznik2013.chr3.g10663.01.t
CATGACGAATAAAAAAGACATTACCTTAGTAGATTTCCCTTTATGTCACGATGTCGCCAA
ATACGAGCGGATCACGAAAATTGGACAAGGAACTTTTGGGGAGGTGTTCAAAGCAAAAGA
CAAAAATACCGGAAGACTTGTCGCTTTGAAGAAGGTAATAATGGAGAATGAAAAAGAGGG
GTTTCCAATAACGGCCCTGAGAGAAATCAAAATACTCCAGCAATTGAAGCATGAAAGTAT
TGTTGACTTGATTGAGATATGCAGAGCGAAGCCTACACAATATAATAGGCAAAAGGGATC
CATTTATCTGGTCTTTGAACTGTGCGATCATGATTTAGCGGGCCTACTAAGCAATGCGAC
TGTGAAGTTCACGTTGGGAGAAATCAAAAAGATAATGCAACAGCTTCTGGACGGACTATT
TTATATTCACCGAAATAAGATATTGCACCGAGACATGAAAGCAGCAAATATCCTTATAAC
GAAAACGGGTACTCTGAAACTGGCAGACTTCGGACTGGCTAGAGCATTCAGTTACACCAA
GGCGGGCCAAGCAAACCGATACACTAACAGGGTCGTCACACTGTGGTATCGACCTCCTGA
ATTGCTTCTCGGAGAACGAGACTACGGGCCCCCTATCGACTTGTGGGGTGCGGGTTGCAT
AATGGCAGAGATGTGGACGAGAAGCCCCATTATGCAGGGCGACACTGAGCAAACGCAGTT
GAAGTTGATATGTCAATTGTGCGGCTCGATCACACCGCAGGTATGGCCGACTGTGGGAAA
GTACGATCTCTATTCAAAATTTGAACTTCCAAAGGGACAGAAAAGAAGAGTGAAGGAGCG
ATTGAAAGGATACGTCAAGGACCAATATGCGCTGGATCTCATCGATAAATTACTATGCTT
AGATCCGAAGCACCGTATAGACTCGGACGAAGCCCTCAATCATGATTTTTTCTGGACTGA
ACCTCTGCCAAACGATTTAACTAAAATGCTGTCTCAGCACAAAACTTCTATGTTTGAATA
TCTGGCTCCGCCGAGACGGGTCGGCGCTCACCCGCACGCAAGGAACAATGCGAGACAGCA
TGCCCCGACTGCAGCCGCAGCTAGGCAGCAGCCCACAGATCCCAGTTATGATCGTATATT
TTG

InterProScan

SUPERFAMILY
Kinase-like_dom_sf (IPR011009) - T[15-323] 4.32E-98
Pfam
Prot_kinase_dom (IPR000719) - T[21-317] 1.1E-71
SMART
Prot_kinase_dom (IPR000719) - T[21-317] 8.1E-93
ProSiteProfiles
Prot_kinase_dom (IPR000719) - T[21-317] 44.23
ProSitePatterns
Protein_kinase_ATP_BS (IPR017441) - T[27-50] .
ProSitePatterns
Ser/Thr_kinase_AS (IPR008271) - T[147-159] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDK9_HUMAN 75.281 % 568 0
CDK13_HUMAN 49.338 % 302 2.03E-92
CDK12_HUMAN 50.331 % 298 3.52E-91