- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g06972.01.t
Possible name(s)
USP11; USP2; USP8
Gene model
Location
chr4 [7,047,996 / 7,050,090]
Amino acid sequence
Length: 697
>Boschl.CG.Botznik2013.chr4.g06972.01.p
MQMRKLRPSQDSLQNESKLLNQDNSPAPTSVVDPILIPTKSDTPQPKPDPTSQPDLISSD
SVATTRKLSADDSKADANPKTPSKNENLPVKVPEDPKVSNLSTALKKSIKTPPIPQVKPK
TEQDTKKDPENTPVSNLSTAIKKPPKTPPIPQVKPKIMEQDAKKAPENTLHPQLPSRDTK
PLVPINDTKVDVKPDASITPKASRPLPVPKPSSQPASNSTKKETSALNNNKLTLSTSLPM
NWEKRLDRKTGRYFYLDHKTQTTHWNLPSHVSVKPRSKTVRLKDEPSTTSGGLKRSSSTP
NIAQLVDEQPVPAKPTVNRSKKPSLKDPIKDLSDNPELYAQRLAQLHPNYGARGPGQCGL
YNLGNTCYMNSVLQCMFSTCLLAEYFLNNVYKNHLNRENFLGSGGEITDGFAMLMKAVWS
GQLKSVTPRDFRNTIGRFNSRFSSYSQQDSQELLLFLMDGLHEDLNQIKIREYKEEPDYD
GKADSEAARMSWDFHKRLNESIIVELFQGQFKAVTQCLSCRKTSRKFDVFMYLSLPVPNR
GSCQITDCLDKFSEVEKLSGDNKWFCPNCKQDRDAVRKLEIWKLPPVLLIHFKRFSFSGR
WGDKLQTNVKFPAQNLDVNKYVIGTKAKNSFNLYAVSHHYGATMDSGHYVATCKNPTDGS
WYKFDDHEVSKASLPSGASAYILCYSSLGHTMKVTGS
Nucleotide sequence
Length: 2,094
>Boschl.CG.Botznik2013.chr4.g06972.01.t
TGCAAATGCGGAAATTGCGTCCTAGTCAAGATTCTCTCCAAAATGAATCAAAGTTATTAA
ATCAGGATAATAGTCCAGCCCCTACATCGGTAGTTGACCCGATTCTCATTCCGACCAAAT
CTGATACACCTCAACCAAAACCTGACCCGACCAGTCAGCCAGACCTGATTTCAAGCGATT
CTGTCGCTACGACAAGAAAACTTTCGGCAGACGACTCCAAGGCCGACGCCAATCCAAAAA
CTCCTTCAAAGAATGAAAACCTCCCAGTGAAAGTACCGGAAGACCCAAAAGTGTCAAATT
TGTCGACTGCTTTGAAAAAATCGATCAAAACCCCCCCGATTCCGCAGGTCAAACCGAAAA
CTGAACAGGACACCAAAAAGGATCCCGAAAACACACCCGTCTCAAATCTGTCGACCGCCA
TCAAAAAACCTCCGAAAACTCCTCCGATTCCACAAGTGAAACCCAAAATTATGGAACAGG
ACGCGAAAAAGGCCCCCGAAAATACACTCCACCCGCAGTTGCCTAGTCGCGACACGAAAC
CTCTTGTACCCATTAATGATACAAAGGTAGATGTGAAACCAGATGCTTCAATCACGCCTA
AAGCATCTCGTCCATTGCCGGTTCCAAAGCCAAGCTCACAGCCTGCGAGTAATTCTACAA
AGAAAGAAACGTCGGCTCTTAACAATAACAAACTAACTCTTTCCACTAGCTTGCCCATGA
ATTGGGAAAAACGTTTGGACAGGAAAACTGGTCGGTATTTTTATCTAGACCACAAAACGC
AAACGACTCATTGGAACTTGCCGAGTCACGTCAGCGTAAAACCACGTTCTAAAACAGTCA
GACTGAAAGATGAACCTTCCACTACAAGCGGTGGACTCAAAAGATCCAGTTCAACCCCAA
ATATCGCTCAACTCGTGGACGAACAACCGGTTCCTGCCAAGCCAACCGTGAACCGTTCTA
AGAAACCTAGTTTAAAAGACCCTATCAAAGATCTATCAGACAATCCTGAATTGTATGCTC
AAAGACTAGCTCAACTACACCCTAACTATGGGGCTCGTGGTCCTGGACAATGTGGGCTGT
ATAATTTAGGGAATACATGCTACATGAACTCGGTATTGCAGTGTATGTTCAGCACTTGCC
TTCTGGCGGAGTACTTTTTGAATAATGTGTACAAAAACCATCTGAATAGAGAAAATTTTT
TGGGGTCTGGAGGCGAGATCACCGACGGTTTCGCGATGCTTATGAAAGCGGTTTGGAGCG
GGCAATTGAAGAGTGTGACGCCTCGCGATTTCAGAAATACGATCGGTCGATTTAACAGCA
GGTTCTCCTCCTATTCGCAACAGGATTCGCAGGAACTTTTGCTGTTTCTAATGGACGGTC
TTCACGAAGACTTGAATCAAATCAAAATTCGGGAATACAAAGAAGAACCCGATTATGATG
GGAAAGCGGATTCAGAAGCGGCTAGAATGTCCTGGGATTTTCACAAACGCCTGAACGAAT
CAATCATCGTCGAGCTGTTTCAAGGACAGTTCAAAGCCGTGACGCAGTGTTTAAGTTGCA
GGAAAACGTCTCGTAAATTTGACGTGTTTATGTATCTTTCGTTGCCCGTTCCGAATCGAG
GCAGTTGTCAGATTACTGATTGTTTGGATAAGTTTTCGGAAGTTGAAAAATTGAGCGGGG
ATAATAAATGGTTTTGTCCGAATTGCAAGCAAGATCGTGACGCGGTCAGGAAGCTGGAAA
TTTGGAAATTACCTCCCGTGCTGCTGATTCATTTCAAAAGGTTTTCGTTTTCCGGACGGT
GGGGAGATAAACTACAGACGAATGTTAAATTTCCTGCGCAAAATCTGGATGTTAACAAGT
ACGTGATTGGAACAAAGGCGAAAAATTCTTTCAACTTGTACGCGGTCTCTCATCATTACG
GAGCTACTATGGACAGCGGGCATTATGTGGCTACGTGCAAAAATCCGACCGATGGATCTT
GGTATAAGTTTGACGACCACGAGGTTTCTAAAGCGTCTCTACCCAGCGGAGCTAGCGCGT
ATATCTTGTGCTATTCTAGCTTGGGACACACTATGAAAGTGACAGGATCGTGAT
| SUPERFAMILY |
WW_dom_sf (IPR036020) - T[229-271] 7.86E-10 |
| ProSiteProfiles |
WW_dom (IPR001202) - T[236-270] 13.949 |
| SMART |
WW_dom (IPR001202) - T[237-270] 1.3E-7 |
| Pfam |
WW_dom (IPR001202) - T[238-268] 1.1E-9 |
| CDD |
WW_dom (IPR001202) - T[241-268] 1.23563E-5 |
| Pfam |
Peptidase_C19_UCH (IPR001394) - T[358-685] 3.2E-72 |
| ProSiteProfiles |
USP_dom (IPR028889) - T[358-688] 57.012 |
| ProSitePatterns |
USP_CS (IPR018200) - T[359-374] . - T[631-649] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| UBP2_HUMAN | 37.685 % | 221 | 1.5E-63 |
| UBP11_HUMAN | 52.717 % | 204 | 2.16E-55 |
| UBP8_HUMAN | 47.983 % | 445 | 7.32E-143 |