- Transcript 'KH2012:KH.C6.234.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g16251.01.t
Possible name(s)
PSMC1; PSMC4
Gene model
Location
chr4 [8,195,430 / 8,199,896]
Amino acid sequence
Length: 441
>Boschl.CG.Botznik2013.chr4.g16251.01.p
MGQNQSGAGRSGGGKKDDKSKEKKKYEKPLPTRVGKKRKRQRGPDAANKLPSVTPHTRCR
LRLLKQERIKDYLLMEEEYIRNQERLKPQEEKQEEERSKVDDLRGSPMSVGSLEEIIDEN
HAIVSTSVGSEHYVSILSFVDKDQLEPGCTVLMNHKVHAVVGFLNDDTDPLVTVMKLEKA
PQESYADIGGLELQITEIKESVELPLTHPEYYEEMGIRPPKGVILYGAPGTGKTLLAKAV
ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYESNS
GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIEFPMPDEK
TKRRIFTIHTARMTLSDDVNIDEYIQAKDDLSGADIKAICTEAGLLALRERRMKVTSEDF
KKSKENVLYRKNEGTPEGLYL
Nucleotide sequence
Length: 1,326
>Boschl.CG.Botznik2013.chr4.g16251.01.t
CATGGGTCAAAACCAAAGTGGTGCAGGCCGATCTGGTGGAGGTAAGAAAGATGACAAAAG
TAAAGAAAAGAAGAAATACGAAAAACCATTGCCAACTCGAGTCGGTAAAAAAAGGAAAAG
GCAAAGAGGGCCTGATGCGGCAAATAAATTACCGAGTGTGACCCCACATACAAGATGTCG
TCTGCGACTTCTTAAGCAAGAAAGAATTAAAGATTATCTCCTGATGGAAGAAGAATACAT
CAGAAATCAGGAGAGGTTGAAGCCACAGGAAGAAAAGCAGGAGGAAGAAAGATCCAAAGT
TGATGATCTGAGAGGATCGCCAATGTCCGTTGGGAGTTTGGAGGAAATTATCGATGAAAA
TCATGCGATCGTGTCTACGTCCGTTGGGTCGGAACATTATGTCAGTATTCTGTCATTCGT
CGACAAGGATCAGCTAGAACCGGGATGCACGGTTTTGATGAATCATAAGGTGCATGCGGT
TGTAGGCTTCCTCAACGATGATACGGATCCATTGGTGACGGTGATGAAATTAGAGAAAGC
TCCCCAAGAATCATACGCCGATATCGGCGGATTAGAATTGCAAATCACAGAAATTAAGGA
ATCTGTTGAACTGCCGCTTACACATCCGGAATATTACGAAGAAATGGGCATCAGACCTCC
GAAAGGAGTGATTCTTTACGGTGCGCCAGGCACAGGCAAAACGCTTCTGGCTAAAGCTGT
CGCCAACCAAACTTCAGCCACATTCTTGCGAGTTGTCGGGTCTGAGCTGATCCAGAAGTA
TCTCGGCGACGGTCCAAAACTCGTCAGGGAATTGTTTCGCGTTGCAGAGGAGCACGCTCC
TTCTATTGTGTTCATTGATGAAATTGACGCGATTGGAACGAAACGTTACGAGTCCAATTC
CGGAGGGGAAAGGGAAATTCAAAGGACCATGTTGGAATTGTTGAATCAACTCGACGGTTT
CGACTCTCGGGGGGACGTCAAGGTTATTATGGCCACGAACCGTATCGACTCGCTCGACCC
CGCTCTTATCCGACCAGGAAGAATTGATAGAAAAATCGAATTTCCGATGCCCGACGAAAA
GACAAAACGCCGCATATTCACGATTCACACAGCACGCATGACGCTCAGCGACGATGTTAA
TATCGACGAGTACATCCAAGCAAAAGATGACCTGTCTGGTGCAGATATAAAGGCCATTTG
CACCGAAGCCGGGCTTCTGGCTTTGCGAGAAAGAAGAATGAAAGTGACCAGTGAAGATTT
CAAGAAGTCGAAAGAGAACGTGCTGTATCGCAAGAACGAAGGAACTCCAGAAGGATTGTA
CCTGTA
| PANTHER |
26S_subunit_4 (IPR035244) - T[1-441] 4.2E-257 |
| TIGRFAM |
26S_Psome_P45-like (IPR005937) - T[76-427] 1.4E-136 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[181-433] 4.81E-65 |
| SMART |
AAA+_ATPase (IPR003593) - T[219-358] 1.8E-19 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[223-355] 3.3E-42 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[326-344] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PRS8_HUMAN | 50.926 % | 345 | 4.98E-116 |
| PRS4_HUMAN | 88.462 % | 756 | 0 |
| PRS6B_HUMAN | 49.596 % | 392 | 1.89E-134 |