Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C6.234.v1....'
  2. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr4.g16251.01.t

Possible name(s)

PSMC1; PSMC4

Location

chr4 [8,195,430 / 8,199,896]

Sequences

Amino acid sequence

Length: 441

>Boschl.CG.Botznik2013.chr4.g16251.01.p
MGQNQSGAGRSGGGKKDDKSKEKKKYEKPLPTRVGKKRKRQRGPDAANKLPSVTPHTRCR
LRLLKQERIKDYLLMEEEYIRNQERLKPQEEKQEEERSKVDDLRGSPMSVGSLEEIIDEN
HAIVSTSVGSEHYVSILSFVDKDQLEPGCTVLMNHKVHAVVGFLNDDTDPLVTVMKLEKA
PQESYADIGGLELQITEIKESVELPLTHPEYYEEMGIRPPKGVILYGAPGTGKTLLAKAV
ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYESNS
GGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIEFPMPDEK
TKRRIFTIHTARMTLSDDVNIDEYIQAKDDLSGADIKAICTEAGLLALRERRMKVTSEDF
KKSKENVLYRKNEGTPEGLYL

Nucleotide sequence

Length: 1,326

>Boschl.CG.Botznik2013.chr4.g16251.01.t
CATGGGTCAAAACCAAAGTGGTGCAGGCCGATCTGGTGGAGGTAAGAAAGATGACAAAAG
TAAAGAAAAGAAGAAATACGAAAAACCATTGCCAACTCGAGTCGGTAAAAAAAGGAAAAG
GCAAAGAGGGCCTGATGCGGCAAATAAATTACCGAGTGTGACCCCACATACAAGATGTCG
TCTGCGACTTCTTAAGCAAGAAAGAATTAAAGATTATCTCCTGATGGAAGAAGAATACAT
CAGAAATCAGGAGAGGTTGAAGCCACAGGAAGAAAAGCAGGAGGAAGAAAGATCCAAAGT
TGATGATCTGAGAGGATCGCCAATGTCCGTTGGGAGTTTGGAGGAAATTATCGATGAAAA
TCATGCGATCGTGTCTACGTCCGTTGGGTCGGAACATTATGTCAGTATTCTGTCATTCGT
CGACAAGGATCAGCTAGAACCGGGATGCACGGTTTTGATGAATCATAAGGTGCATGCGGT
TGTAGGCTTCCTCAACGATGATACGGATCCATTGGTGACGGTGATGAAATTAGAGAAAGC
TCCCCAAGAATCATACGCCGATATCGGCGGATTAGAATTGCAAATCACAGAAATTAAGGA
ATCTGTTGAACTGCCGCTTACACATCCGGAATATTACGAAGAAATGGGCATCAGACCTCC
GAAAGGAGTGATTCTTTACGGTGCGCCAGGCACAGGCAAAACGCTTCTGGCTAAAGCTGT
CGCCAACCAAACTTCAGCCACATTCTTGCGAGTTGTCGGGTCTGAGCTGATCCAGAAGTA
TCTCGGCGACGGTCCAAAACTCGTCAGGGAATTGTTTCGCGTTGCAGAGGAGCACGCTCC
TTCTATTGTGTTCATTGATGAAATTGACGCGATTGGAACGAAACGTTACGAGTCCAATTC
CGGAGGGGAAAGGGAAATTCAAAGGACCATGTTGGAATTGTTGAATCAACTCGACGGTTT
CGACTCTCGGGGGGACGTCAAGGTTATTATGGCCACGAACCGTATCGACTCGCTCGACCC
CGCTCTTATCCGACCAGGAAGAATTGATAGAAAAATCGAATTTCCGATGCCCGACGAAAA
GACAAAACGCCGCATATTCACGATTCACACAGCACGCATGACGCTCAGCGACGATGTTAA
TATCGACGAGTACATCCAAGCAAAAGATGACCTGTCTGGTGCAGATATAAAGGCCATTTG
CACCGAAGCCGGGCTTCTGGCTTTGCGAGAAAGAAGAATGAAAGTGACCAGTGAAGATTT
CAAGAAGTCGAAAGAGAACGTGCTGTATCGCAAGAACGAAGGAACTCCAGAAGGATTGTA
CCTGTA

InterProScan

PANTHER
26S_subunit_4 (IPR035244) - T[1-441] 4.2E-257
TIGRFAM
26S_Psome_P45-like (IPR005937) - T[76-427] 1.4E-136
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[181-433] 4.81E-65
SMART
AAA+_ATPase (IPR003593) - T[219-358] 1.8E-19
Pfam
ATPase_AAA_core (IPR003959) - T[223-355] 3.3E-42
ProSitePatterns
ATPase_AAA_CS (IPR003960) - T[326-344] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PRS8_HUMAN 50.926 % 345 4.98E-116
PRS4_HUMAN 88.462 % 756 0
PRS6B_HUMAN 49.596 % 392 1.89E-134