- Transcript 'KH2012:KH.L112.2.v4....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g20484.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
chr4 [8,745,716 / 8,750,014]
Amino acid sequence
Length: 282
>Boschl.CG.Botznik2013.chr4.g20484.01.p
LSGMGAGIDSYFEYLLKAHVLFGEDADLQMFTEAMQSVKHFLRRGREHCNSGLGDPPIYV
NVDITNGFMLNTWVDSLQAFLPGLLVLNGEVEEAICCHALHYAIWKRYEALPERFNWKMK
HPDVFFYPLRPELVESTYLLYRATKNPFYLHVGRDILNAINRHARTTCGYASLHNVLDKS
QEDRMESFFLSETCKYLYLLFDFENPVNSEDLQWIFTTEGHLLKVGEVSRRKLWDSTCFD
ADLGLNYNVLAVRNCSRVALERTFGLPLRHKYLNQVRELVGA
Nucleotide sequence
Length: 850
>Boschl.CG.Botznik2013.chr4.g20484.01.t
CTGAGTGGCATGGGCGCGGGCATAGACTCGTATTTCGAGTATTTGCTCAAGGCGCATGTC
TTGTTCGGGGAGGACGCAGATCTTCAAATGTTCACGGAAGCTATGCAGAGTGTCAAGCAT
TTTCTAAGACGAGGGAGGGAGCACTGCAACAGCGGGTTGGGCGACCCCCCTATCTATGTC
AATGTCGACATCACAAACGGATTCATGTTGAACACGTGGGTCGACTCCTTGCAGGCGTTT
CTGCCAGGACTTCTGGTTTTGAACGGAGAGGTGGAGGAGGCCATATGCTGCCACGCGTTG
CATTACGCCATTTGGAAAAGGTACGAGGCCCTGCCGGAACGCTTCAACTGGAAAATGAAA
CACCCGGACGTGTTCTTCTATCCGTTGCGGCCCGAATTGGTGGAGAGCACCTATCTGCTT
TATCGCGCGACGAAAAATCCGTTTTACCTGCACGTGGGACGAGATATTCTTAACGCAATC
AACCGGCACGCTAGAACGACCTGTGGATACGCATCTCTGCACAACGTCTTGGACAAATCG
CAGGAGGACAGGATGGAGTCTTTCTTTCTCAGCGAGACTTGCAAGTATCTATATTTGGTG
TTCGATTTCGAGAACCCGGTCAACAGTGAAGATCTACAATGGATATTCACGACCGAAGGC
CACCTCCTGAAAGTCGGGGAGGTATCGCGTAGAAAGTTGTGGGACTCGACCTGTTTCGAC
GCTGACCTTGGGTTAAATTATAACGTCTTGGCCGTGAGAAATGGCAGCCGAGTCGCGCTT
GAACGAACCTTCGGACTGCCTCTCCGTCACAAATATTTGAATCAAGTTCGAGAGCTGGTC
GGCGCGTGAC
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[1-236] 3.8E-72 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[2-231] 5.76E-68 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[3-225] 1.0E-55 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[5-22] 2.2E-27 - T[73-89] 2.2E-27 - T[128-152] 2.2E-27 - T[187-207] 2.2E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 44.248 % | 184 | 1.14E-52 |
| EDEM2_HUMAN | 37.864 % | 145 | 9.3E-40 |
| EDEM1_HUMAN | 57.823 % | 362 | 9.7E-122 |