- Clone 'ciht012i04' >
- Clone 'cilv052e16' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g48046.02.t
Possible name(s)
FUBP1; FUBP3; KHSRP
Gene model
Location
chr4 [3,615,022 / 3,622,780]
Amino acid sequence
Length: 783
>Boschl.CG.Botznik2013.chr4.g48046.02.p
MAAVIGNASGDAQSTAPGYADALQRAREIASKIQPENPGPMGDYSNKRPLEDSGEHSDEP
GAKKLASQNDINITIGAMQQPLGTGGRVPTSENIHLPDKLVGLIIGKGGENITKLQAQTG
CRIQIAQECAENNERPCTLTGTPEQIATCRATLQEVIKNANLGGGGGGGGGGGGMGNIAG
LEEMSGNGAQTVIQLMIPPDKCGLIIGKGGDTIKSLQQNIGVKMMLIQDTTQNTGLDKPL
RISGDPMKVQQAKQAVDQLMAQRDAQMASGRQGGGGMGGGMNRGYDHQGGGMGQNRVSIP
VPKPAVGVVIGKGGEMITRIQNETHTRVQFKQEEDDPNVQHRMCTISGTPDGVQEAIARV
NELVQSVQEHDGGGKQNTSSISETWQNGVPKMAAVIGNASGDAQSTAPGYADALQRAREI
ASKIQPENPGPMGDYSNKRPLEDSGEHSDEPGAKKLASQNDINITIGAMQQPLGTGGRVP
TSENIHLPDKLVGLIIGKGGENITKLQAQTGCRIQIAQECAENNERPCTLTGTPEQIATC
RATLQEVIKNANLGGGGGGGGGGGGMGNIAGLEEMSGNGAQTVIQLMIPPDKCGLIIGKG
GDTIKSLQQNIGVKMMLIQDTTQNTGLDKPLRISGDPMKVQQAKQAVDQLMAQRDAQMAS
GRQGGGGMGGGMNRGYDQHQGGGMGQNRVSIPVPKPAVGVVIGKGGEMITRIQNETHTRV
QFKQEEDDPNVQHRMCTISGTPDGVQEAIARVNELVQSVQEHDGGGKQNTSSISETWQNG
VPK
Nucleotide sequence
Length: 1,179
>Boschl.CG.Botznik2013.chr4.g48046.02.t
TGGCCGCCGTCATTGGCAACGCTTCAGGAGACGCTCAAAGTACAGCACCGGGATACGCCG
ACGCTTTACAGAGAGCTCGTGAGGTTGCATCGAAAATTCAACCTGAAAACCCCGGGCCTA
TGGGAGATTACTCGAACAAGCGCCCATTAGAAGACTCCGGTGAACATTCTGGTGAGCCAG
GTGCCAAAAAGCTGGCTTCCCAAAATGATAGCAACATTACAATAGGAGCGATGCAACAAC
CACTTGGTACTGGTGGGAGGGTTCCGACATCCGAGAACATACATCTGCCAGACAAGCTAG
TTGGATTAAGTATCGGTAAAGGCGGTGAAAACATCACAAAGCTCCAAGCGCAGACTGGTT
GCAGGATACAGATTGCTCAGGAATGCGCTGAAAACAACGAGAGGCCGTGCACGTTGACCG
GTACCCCGGAACAAATTGCGACCTGTCGCGCCACGCTGCAAGAAGTCATCAAAAACGCCA
ACCTTGGTGGTGGTGGTGGCGGAGGAGGAGGCGGTGGGGGCATGGGTAACATCGCCGGTC
TCGAAGAGATGAGCGGAAACGGCGCTCAGACTGTTATACAACTGATGATACCGCCGGACA
AGTGCGGTTTGATCATCGGAAAAGGCGGCGACACGATAAAATCGGTTCAACAGAACATCG
GTGTGAAAATGATGTTGATTCAAGACACAACTCAGAACACGGGACTCGATAAGCCTTTGC
GGATATCGGGAGACCCCATGAAAGTTCAGGAAGCCAAACAGGCGGTGGACCAGTTGATGG
CGCAGAGAGACGCGCAAATGGCATCCGGCCGACAAGGCGGCGGTGGTATGGGAGGCGGCA
TGAATAGAGGTTATGATGAGCATCAAGGCGGGGGTATGGGACAAAACCGAGTCAGCATTC
CGGTCCCGAAACCCGCCGTCGGCGTCGTGATCGGTAAAGGGGGCGAGATGATCACGAGAA
TCCAGAACGAGACCCACACGCGGGTGCAGTTCAAGCAAGAAGAAGGTGATCCCAACGTAC
AGCACAGGATGTGTACGATTAGCGGCACCCCTGACGGCGTGCAGGAAGCGATCGCACGCG
TCAACGAACTGGTGCAGAGCGTCCAAGAACACGACGGCGGCGGTAAGCAGAATACTAGTT
CTATTTCTGAGACTTGGCAAAACGGAGTACCCAAGTGAT
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[82-182] 4.0E-24 - T[183-262] 1.3E-23 - T[285-389] 3.7E-24 - T[473-573] 3.8E-24 - T[574-653] 1.3E-23 - T[676-780] 4.6E-24 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[88-160] 1.9E-18 - T[182-262] 5.7E-16 - T[285-370] 1.15E-18 - T[479-551] 1.9E-18 - T[573-653] 5.7E-16 - T[682-761] 2.48E-18 |
| SMART |
KH_dom (IPR004087) - T[88-158] 6.9E-17 - T[189-261] 2.3E-15 - T[293-365] 1.3E-15 - T[479-549] 6.9E-17 - T[580-652] 2.3E-15 - T[685-757] 1.3E-15 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[92-154] 1.3E-16 - T[193-257] 1.0E-12 - T[297-362] 1.2E-15 - T[483-545] 1.3E-16 - T[584-648] 1.0E-12 - T[689-754] 1.2E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FUBP1_HUMAN | 41.737 % | 233 | 6.57E-67 |
| FUBP2_HUMAN | 41.713 % | 224 | 4.64E-63 |
| FUBP3_HUMAN | 36.997 % | 217 | 1.32E-61 |