- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g48948.01.t
Possible name(s)
PTPRE; PTPRF; PTPRS
Gene model
Location
chr4 [3,741,297 / 3,750,054]
Amino acid sequence
Length: 290
>Boschl.CG.Botznik2013.chr4.g48948.01.p
MRQQRVDMVQTSDQYQMLHKLMMERQYFRETDFDRNDLLKEKKNWDESQELTLLNMFDAM
HPKWRQNSPSNSSNVVIVRQPEDTEWVRIDATFVEAYQDQVYFIASVGPSNSTVEYFLRA
LWDNFVDYVIMLNKPSEEALDNHGQFCDYWPTQLNSPETYNSITITLQSEQAARGWVERT
FYLERRNQPARTIRHYQYLHWECDHAPEKPDLLLDLIQHMIRQSSKDGATVLVHCTNDLG
RTGVFIALANIITRLQFENRIDVVRTVKDLKDIRPGIVQTLVISGCRFML
Nucleotide sequence
Length: 873
>Boschl.CG.Botznik2013.chr4.g48948.01.t
TGCGACAACAGAGAGTTGATATGGTTCAAACCAGCGATCAATATCAGATGCTTCATAAAC
TGATGATGGAGCGGCAATATTTCAGGGAGACGGACTTCGACCGAAATGACTTGCTAAAAG
AGAAGAAGAATTGGGAGGAGAGTCAGGAGTTAACACTGCTCAATATGTTCGACGCAATGC
ATCCAAAATGGCGTCAAAATTCACCATGGAACTCTTCAAACGTTGTCATTGTAAGACAAC
CAGAAGACACCGAGTGGGTCAGGATTGATGCTACATTTGTGGAGGCTTACCAAGACCAGG
TGTATTTCATCGCATCTGTAGGACCCTCAAATTCTACAGTGGAATATTTTCTACGTGCAT
TATGGGATAACTTCGTTGACTATGTCATTATGCTGAACAAGCCATCCGAAGAAGCACTGG
ATAATCACGGTCAATTCTGCGATTACTGGCCGACTCAGCTAAACTCGCCTGAAACCTACA
ACAGCATTACCATCACGCTACAGAGTGAACAAGCAGCAAGGGGGTGGGTGGAAAGGACAT
TTTATCTCGAGAGACGTAATCAACCAGCAAGAGCGATCAGACACTATCAATATTTACATT
GGGAATGTGACCATGCCCCCGAGAAACCTGATCTGCTGCTTGATCTTATTCAACACATGA
TCAGGCAGAGCTCAAAGGATGGAGCAACTGTATTGGTGCATTGCACGAACGATTTGGGAA
GAACGGGAGTTTTCATAGCACTTGCGAACATTATCACAAGACTGCAGTTCGAAAATCGCA
TTGACGTCGTACGTACCGTCAAAGATCTCAAAGATATTCGACCCGGAATCGTTCAAACTC
TGGTAATAAGTGGATGCCGTTTTATGTTATGAT
| Gene3D |
Prot-tyrosine_phosphatase-like (IPR029021) - T[32-283] 3.2E-50 |
| SMART |
PTPase_domain (IPR000242) - T[43-287] 6.5E-17 |
| SUPERFAMILY |
Prot-tyrosine_phosphatase-like (IPR029021) - T[63-281] 5.5E-48 |
| ProSiteProfiles |
PTPase_domain (IPR000242) - T[69-280] 27.549 |
| Pfam |
PTPase_domain (IPR000242) - T[70-281] 3.2E-39 |
| PRINTS |
PTPase_domain (IPR000242) - T[103-123] 4.9E-14 - T[191-208] 4.9E-14 - T[230-248] 4.9E-14 - T[261-276] 4.9E-14 |
| SMART |
Tyr_Pase_cat (IPR003595) - T[192-288] 3.1E-10 |
| ProSiteProfiles |
TYR_PHOSPHATASE_dom (IPR000387) - T[211-280] 16.688 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRF_HUMAN | 27.508 % | 115 | 8.76E-29 |
| PTPRS_HUMAN | 28.479 % | 119 | 4.49E-30 |
| PTPRE_HUMAN | 29.487 % | 122 | 2.03E-31 |