- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr4.g71709.01.t
Possible name(s)
LANCL1; LANCL2; LANCL3
Gene model
Location
chr4 [332,593 / 333,751]
Amino acid sequence
Length: 385
>Boschl.CG.Botznik2013.chr4.g71709.01.p
MPANLLTMTNEGISIKDDVKAKLKRCXNDMXQEIDHADCSFXARDNSVYTGMTGYALLYL
HMYEVFNHPSHLTLXTXYVAGXLEKFKRRRITFLCGDAGPLALGAVIYNMNGHKGRSLEC
LDRLKSIXTSVXPMSSETYDELLYGRAGYLYSLLYVRKYLGEQSVSDKIINDVVDSMXES
GNNQXISKXSSSRLAYKWHGSEYIGAAHGYIGILYLMLHTDYKRHDEAIKSTLQFILDLQ
YPSGNFPSSCGSDKDKLVHWCHGAPGGIYLMIKXYSEFKEDKYLTSAQKAADTIWERGLL
KKGYGICHGAAGNGXAFLAMYNLTKDPKYLYRAXYFGLWCCDYKRRQGLRIPDRXYXMFE
XIAGTAYFLSDLFQHEKAAFPAFEL
Nucleotide sequence
Length: 1,158
>Boschl.CG.Botznik2013.chr4.g71709.01.t
TGCCAGCCAACTTATTGACGATGACGAACGAAGGCATATCTATCAAGGATGATGTGAAGG
CAAAGTTAAAACGATGTCTNAATGATATGNTGCAAGAAATAGACCACGCAGACTGTTCAT
TTGANGCTCGTGATAATTCAGTATACACTGGCATGACTGGATACGCGTTACTGTACTTGC
ACATGTACGAAGTTTTCAATCATCCATCTCATCTGACTCTTGCNACATCNTATGTTGCTG
GTGCNCTGGAGAAATTTAAGCGCCGCCGTATAACATTCTTGTGCGGTGACGCTGGACCCC
TTGCACTTGGTGCTGTGATTTATAATATGAATGGACACAAAGGCAGGTCACTTGAATGCC
TGGATAGGCTGAAATCAATAGTNACCTCCGTTCTNCCTATGTCTAGTGAAACATATGATG
AATTGCTATACGGAAGAGCTGGATACCTGTACTCTCTTTTATACGTGAGAAAATATCTTG
GAGAGCAGAGTGTTTCAGACAAAATTATTAATGATGTTGTTGACAGCATGNTTGAATCAG
GTAACAATCAAGANATCAGCAAATNNTCCAGTTCACGACTTGCTTACAAGTGGCACGGCT
CGGAATACATTGGTGCCGCGCACGGCTATATCGGAATACTGTATCTCATGCTTCACACAG
ATTACAAACGCCATGACGAAGCCATCAAGTCCACATTGCAATTTATTCTCGATTTACAAT
ACCCTTCTGGAAATTTTCCCTCTTCGTGTGGAAGTGACAAGGATAAGCTGGTGCATTGGT
GTCACGGTGCACCAGGAGGTATTTATCTTATGATAAAAGCNTATTCTGAATTCAAGGAAG
ACAAGTATTTGACCAGTGCACAGAAGGCTGCGGACACCATCTGGGAACGGGGTCTGCTGA
AGAAGGGTTATGGGATATGCCATGGTGCTGCGGGTAATGGGTANGCATTTCTGGCTATGT
ACAATCTGACAAAGGACCCCAAGTACCTTTACCGCGCCNTTTACTTTGGGCTTTGGTGTT
GCGATTACAAGCGCAGGCAAGGCCTACGAATTCCTGACCGGCCNTATTCNATGTTTGAAG
GNATAGCGGGAACTGCCTACTTTTTATCTGACCTTTTTCAGCACGAAAAGGCTGCCTTTC
CTGCCTTTGAACTGTAAA
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[3-385] 1.1E-129 |
| SMART |
LANC-like (IPR007822) - T[42-385] 8.2E-102 |
| Pfam |
LANC-like (IPR007822) - T[44-385] 2.9E-75 |
| PRINTS |
LANC-like (IPR007822) - T[45-63] 6.2E-41 - T[140-155] 6.2E-41 - T[203-219] 6.2E-41 - T[257-277] 6.2E-41 - T[304-317] 6.2E-41 - T[355-372] 6.2E-41 |
| CDD |
LanC-like_prot_euk (IPR020464) - T[48-381] 2.79459E-129 |
| PRINTS |
LanC-like_prot_euk (IPR020464) - T[170-185] 5.1E-27 - T[192-204] 5.1E-27 - T[237-252] 5.1E-27 - T[274-295] 5.1E-27 - T[320-338] 5.1E-27 - T[371-385] 5.1E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LANC2_HUMAN | 46.113 % | 339 | 5.51E-114 |
| LANC1_HUMAN | 42.44 % | 322 | 5.51E-108 |
| LANC3_HUMAN | 35.197 % | 188 | 1.07E-55 |