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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Transcript 'Haaura.CG.MTP2014.S3...' > 
  3. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g22343.01.t

Possible name(s)

EMC2; TTC7A

Gene model

Boschl.CG.Botznik2013.chr5.g22343

Location

chr5 [27,391,922 / 27,396,721]

Sequences

Amino acid sequence

Length: 193

>Boschl.CG.Botznik2013.chr5.g22343.01.p
IRLNWCAQHYSNNIFCQAALKRKAAINKASGKIPEAIKCITDYLKIFMADTEAWLELSDL
YIEELEFSKAAFCLEEAILSQPRSHLYHQRFAEIKYSQGGMENIKVAKDHFAEAVFLSNK
TNIRALYGLILTCTRLMSGKSSEDKKNVKKYMDWACRIVTLKHKEAEEEDASRLASEDLE
DVHSMLGKLSLTT

Nucleotide sequence

Length: 582

>Boschl.CG.Botznik2013.chr5.g22343.01.t
TTCGATTAAACTGGTGTGCTCAACATTATAGTAACAATATATTTTGTCAGGCCGCTTTGA
AGAGGAAAGCTGCCATTAACAAGGCCTCGGGGAAGATTCCAGAAGCAATAAAATGTATTA
CTGATTATCTCAAAATGTTCATGGCGGACACTGAAGCTTGGCTTGAGTTATCAGATTTAT
ACATAGAAGAACTGGAGTTCAGCAAAGCAGCATTCTGCCTGGAAGAAGCAATACTATCAC
AACCACGTAGTCATCTCTATCACCAAAGATTTGCTGAGGTCAAGTATAGTCAAGGAGGAA
TGGAGAATATAAAAGTGGCCAAGGATCATTTTGCCGAAGCCGTCTTCCTCAGTAATAAGA
CGAATATCAGGGCTCTATACGGCCTTATTTTGGCATGTACACGGTTGATGTCCGGCAAGA
GTAGCGAGGACAAAAAGAATGTGAAGAAGTACATGGACTGGGCCTGTCGAATAGTTACGC
TGAAACATAAGGAGGCGGAGGAAGAGGATGCTTCCAGACTTGCTTCGGAGGATCTCGAAG
ACGTTCATTCCATGCTGGGGAAGTTGAGCTTGACAACGTAAC

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[4-190] 1.6E-10
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[16-136] 4.11E-11
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[17-84] 9.53
ProSiteProfiles
TPR_repeat (IPR019734) - T[51-84] 8.29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EMC2_HUMAN 42.373 % 141 1.27E-41