Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g33946.01.t

Possible name(s)

CRYM

Gene model

Boschl.CG.Botznik2013.chr5.g33946

Location

chr5 [29,957,006 / 29,967,694]

Sequences

Amino acid sequence

Length: 290

>Boschl.CG.Botznik2013.chr5.g33946.01.p
METIPYIGAEFVKNHLSYAELIPAVRRALQEYSSNRSVQPLRTAVSVPEANGTLLTMPSY
SSTDKTLMTKLIGLYPDNTKHNLPTHHCYITLFDENTGVLKCLMDGEIITAMRTAAATVV
ATQAVFEGKPRILCIIGSGLQAKSHIAAFSEAYTFEKVKIWGRDHQKAANVCSEFKQLVM
ENCETIEDAVKDADVIVTVTHASGPILKGAWVKKGAHINCVGACRPTWRECDDECLTNAT
VYCDSVESASNESGDVILSKADVYGEVGEVLLGMKPLRPAHHTFFKSLGT

Nucleotide sequence

Length: 873

>Boschl.CG.Botznik2013.chr5.g33946.01.t
CATGGAAACTATTCCGTATATTGGAGCTGAATTCGTAAAAAACCATCTCAGTTACGCGGA
ACTTATCCCTGCCGTACGGAGAGCTCTACAAGAGTATTCCAGCAACAGGTCCGTTCAGCC
CTTACGAACTGCTGTATCTGTACCGGAGGCCAATGGAACGCTACTTACAATGCCAAGCTA
CAGTTCAACGGACAAGACTCTGATGACCAAATTGATTGGACTTTATCCGGACAATACCAA
ACACAATTTACCGACTCATCACTGTTACATCACGCTGTTTGATGAAAATACCGGCGTTCT
CAAATGGTTAATGGACGGTGAGATAATCACAGCAATGAGAACTGCAGCGGCCACTGTAGT
AGCAACTCAGGCTGTTTTCGAAGGCAAGCCAAGGATTCTCTGTATAATTGGTTCCGGACT
GCAGGCCAAAAGTCACATTGCAGCATTTTCGGAGGCTTATACATTTGAAAAGGTAAAGAT
TTGGGGCAGAGACCACCAAAAGGCGGCAAACGTTTGCAGCGAATTCAAGCAGTTGGTCAT
GGAGAATTGCGAAACGATTGAGGACGCCGTCAAAGATGCAGACGTCATAGTGACCGTGAC
GCATGCGTCCGGGCCTATACTCAAGGGCGCCTGGGTGAAAAAGGGGGCACATATAAATGG
TGTTGGCGCATGCAGACCGACGTGGAGAGAGTGTGACGATGAATGTCTGACTAATGCAAC
CGTGTACTGCGACAGCGTAGAATCTGCTTCGAACGAGTCCGGAGATGTGATACTGTCAAA
GGCCGATGTGTACGGAGAGGTCGGTGAAGTCTTGCTTGGGATGAAGCCTCTACGACCGGC
ACATCACACTTTTTTCAAGTCTCTCGGTACGTA

InterProScan

PIRSF	ODC_Mu_crystall (IPR003462) - T[3-290] 2.1E-76
SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[3-290] 1.26E-75
PANTHER	ODC_Mu_crystall (IPR003462) - T[5-290] 1.6E-89
Pfam	ODC_Mu_crystall (IPR003462) - T[12-290] 7.0E-65
Gene3D	ODC_N (IPR023401) - T[21-126] 6.7E-91 - T[290-290] 6.7E-91

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CRYM_HUMAN	43.729 %	242	2.77E-79