- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g48497.01.t
Possible name(s)
NHLH1; NHLH2; TWIST2
Gene model
Location
chr5 [15,347,299 / 15,349,020]
Amino acid sequence
Length: 151
>Boschl.CG.Botznik2013.chr5.g48497.01.p
MRPAGRGLSSPGLTTIDGTNSHQRIQSSKCILDCSSSSSTPSTINGTIKRKSPLAAQKEK
QRLRVFNDAMEDLQKVIPVRLPKGRKLQKKQTLQFAIKYIEFLQSCIDGKNDFNDRYRFM
WTEGTEQGEAINAIDMAARKSSDSVHGETVK
Nucleotide sequence
Length: 456
>Boschl.CG.Botznik2013.chr5.g48497.01.t
CATGCGGCCCGCGGGCCGTGGTTTGTCCTCCCCTGGTCTGACGACAATCGATGGTACTAA
CAGCCATCAGCGAATACAATCGAGCAAATGCATACTCGATTGCTCTTCAAGCTCATCGAC
CCCAAGCACGATCAACGGCACCATAAAAAGAAAGAGTCCGTTGGCAGCCCAAAAAGAGAA
GCAGCGCCTCCGCGTTTTTAACGACGCGATGGAGGATCTGCAGAAAGTAATTCCGGTTCG
ATTGCCCAAAGGGCGAAAACTACAGAAGAAACAAACCCTTCAGTTCGCTATCAAGTATAT
TGAATTTCTGCAAAGCTGCATTGACGGAAAAAACGACTTCAACGATCGCTACCGATTCAT
GTGGACAGAGGGCACGGAACAAGGGGAAGCGATTAACGCTATTGACATGGCGGCTCGCAA
ATCCTCCGACAGTGTACACGGTGAAACAGTGAAATA
| PANTHER |
Twist-related (IPR015789) - T[24-140] 6.3E-25 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[48-114] 6.3E-13 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[50-103] 11.242 |
| SMART |
bHLH_dom (IPR011598) - T[56-109] 4.1E-6 |
| Pfam |
bHLH_dom (IPR011598) - T[57-104] 1.4E-9 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[57-121] 2.22E-11 |
| CDD |
bHLH_dom (IPR011598) - T[59-104] 4.79053E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|