- Region 'REG00001505' >
- Clone 'cien31603' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g57997.01.t
Possible name(s)
EXD3; EXOSC10
Gene model
Location
chr5 [9,445,968 / 9,448,269]
Amino acid sequence
Length: 766
>Boschl.CG.Botznik2013.chr5.g57997.01.p
MAXSSVXSSSSXVEDVXQFTTNLLKTVSSAVKASASXPHSGDDYDLYCSFSGFREFYAEQ
SSRLTRTLNTFMTHQGVXLLXSQESGVGDIDDSYDRIVEANDTMLXQVAGLXEKASDPEK
NVVNPEILSTDSPAQNIPKTVVSSWNRNRKSGKNQMFRLFHXQNISRXQTXFXXKIDNSX
VPFVPKIKEKPNATKPLPKALVDLNTQQDGIISLAITHLVRQGRDYSMEDQDIYTHXYQF
ELNSLQYNQEQMQEVEPQKYDPXPPQPCEVIXAKMDLISVVDHLXTCKXIXVDLEAHXYR
TFQGLTCLMQISSRXKDFLIDTLALRSEIYRFNEVFTDPKXXKVFHGADFDIQWLQRDFG
VYVVNMFDTGQAARVLGLSRFSLDFLLQKYCDVHADKKYQLADWRIRPIPEEMRKYAQED
THYLLYVYDVMKNELLSHSDGKKEARLIKVLEKSREICLRLYEKPLINANSHINLYEKWR
SKRRLNDKQLELFRLLFLWRDAMARQEDESTGXVLPKHMLFQXAEIMPREAQGILACCQP
VPPLVHQHMHSLHQLVLEARAFTKKAGKSAQSEETETPVSVKPEIHEYDDFLTCPHDVSH
PDKSSYGHHQVFMQPTVLLSRSNFMTPYVPVYVPVKVSNGLAKTHWDPYVKYFEPHNGAT
PAPSNLITTIENMSLRTMLSPDYAWKLKDLHAGQQPVEKKAKKPIKQPDTKDEVIILSKL
PEKRXLQPSQPDKKPSRLAKKKAKKAAAADVQPFQYDASHYNRFKK
Nucleotide sequence
Length: 2,301
>Boschl.CG.Botznik2013.chr5.g57997.01.t
TATGGCGTCNTCTTCCGTACCNTCGTCATCTTCCANTGTCGAAGATGTCCCNCAGTTCAC
GACCAATTTGTTGAAAACTGTTTCTAGCGCGGTCAAAGCCAGCGCTTCCNTGCCGCATTC
TGGAGACGACTATGACTTGTACTGCAGTTTTTCTGGATTTCGAGAATTCTACGCCGAACA
ATCGTCGCGTTTGACAAGAACTCTCAACACATTTATGACTCACCAAGGAGTTCGNTTATT
ACCNAGTCAAGAATCGGGAGTCGGAGACATCGATGACAGCTACGATAGAATCGTCGAGGC
AAATGACACCATGTTAGANCAGGTGGCGGGATTGTTNGAAAAAGCCAGCGACCCTGAAAA
GAATGTTGTTAATCCGGAGATATTATCAACCGACAGCCCGGCTCAGAATATTCCGAAAAC
GGTAGTATCGTCATGGAATCGAAACAGAAAGAGCGGAAAAAATCAAATGTTTCGCCTATT
CCATGCNCAAAACATTTCAAGGCCNCAAACCNATTTCAGNGNCAAAATAGACAACTCTAA
NGTTCCGTTTGTGCCCAAAATTAAGGAAAAACCCAACGCTACAAAGCCCTTACCGAAAGC
TTTGGTAGATCTGAACACGCAACAAGATGGAATCATTTCTCTAGCCATCACACATCTTGT
ACGCCAAGGCAGAGACTACAGCATGGAAGACCAAGACATATACACCCACCCNTACCAATT
TGAACTAAACTCCCTGCAATATAACCAAGAACAGATGCAAGAAGTGGAACCGCAAAAATA
CGACCCTTTNCCTCCGCAACCTTGCGAAGTAATCACNGCCAAAATGGATTTGATATCGGT
TGTGGACCATTTGANAACTTGCAAAGANATCGCNGTAGATTTAGAAGCGCACTCNTATCG
GACTTTCCAAGGGTTGACTTGTTTGATGCAGATCTCTTCGAGAANNAAAGATTTTCTCAT
CGACACGCTGGCGTTGCGGTCGGAAATTTATAGATTCAACGAAGTCTTCACGGATCCAAA
GNTCGTNAAAGTATTTCACGGTGCTGATTTCGACATCCAATGGCTTCAGCGCGATTTCGG
GGTTTACGTGGTGAACATGTTCGACACGGGACAAGCGGCTAGGGTGCTGGGTCTATCGCG
TTTTTCTCTTGACTTCTTGCTGCAAAAATACTGCGACGTACATGCCGACAAAAAGTATCA
ATTGGCCGACTGGCGGATCCGGCCGATACCCGAAGAAATGAGGAAGTATGCTCAAGAGGA
CACGCATTATCTTCTGTATGTTTACGATGTCATGAAAAACGAATTGTTATCGCACTCGGA
TGGGAAAAAGGAGGCCAGGCTCATCAAAGTTTTGGAAAAAAGCCGAGAAATCTGTTTGCG
TTTGTACGAAAAGCCACTTATAAATGCAAATTCCCATATCAACCTATATGAGAAGTGGAG
GTCTAAAAGGCGTCTGAACGACAAACAGTTGGAGCTGTTTAGGTTGTTGTTTTTGTGGCG
TGACGCAATGGCACGTCAAGAGGACGAAAGCACCGGCTNCGTTCTGCCAAAACACATGCT
TTTCCAAANTGCGGAAATAATGCCGCGGGAAGCGCAAGGAATCCTCGCGTGCTGTCAGCC
TGTGCCGCCGTTAGTCCATCAGCACATGCATTCTCTCCATCAACTTGTGTTGGAGGCGAG
AGCCTTCACCAAAAAAGCAGGCAAATCCGCACAATCTGAGGAGACGGAAACACCCGTGTC
TGTGAAACCAGAGATTCACGAATATGATGATTTTCTGACGTGCCCACACGACGTGTCGCA
TCCTGACAAGTCAAGTTACGGCCATCATCAAGTTTTTATGCAACCGACGGTGTTGTTGAG
TCGATCTAATTTTATGACTCCCTACGTACCCGTGTACGTTCCGGTGAAAGTTTCAAACGG
ACTGGCGAAGACACATTGGGATCCGTATGTCAAATACTTTGAACCTCATAACGGAGCGAC
CCCAGCGCCGTCTAACCTTATCACCACCATTGAAAATATGTCGCTACGGACTATGCTAAG
TCCGGATTACGCGTGGAAACTGAAGGATTTGCACGCCGGCCAGCAGCCTGTTGAGAAAAA
GGCGAAGAAACCGATCAAGCAGCCCGACACGAAAGACGAAGTCATCATTTTGAGTAAGCT
GCCGGAGAAAAGACCNTTGCAACCGTCGCAGCCTGATAAAAAGCCGTCACGACTCGCTAA
GAAGAAGGCCAAGAAAGCTGCCGCTGCTGATGTGCAGCCTTTCCAGTATGACGCGTCGCA
CTACAATAGATTTAAGAAGTA
| Pfam |
Exosome-assoc_fac_Rrp6_N (IPR012588) - T[29-108] 7.7E-10 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[166-465] 1.21E-73 |
| SMART |
3'-5'_exonuclease_dom (IPR002562) - T[268-436] 1.7E-44 |
| Pfam |
3'-5'_exonuclease_dom (IPR002562) - T[272-435] 6.0E-43 |
| SUPERFAMILY |
HRDC-like_sf (IPR010997) - T[475-564] 1.99E-22 |
| ProSiteProfiles |
HRDC_dom (IPR002121) - T[486-566] 14.877 |
| SMART |
HRDC_dom (IPR002121) - T[486-566] 3.4E-13 |
| Pfam |
HRDC_dom (IPR002121) - T[489-555] 7.6E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOSX_HUMAN | 45.364 % | 519 | 9.66E-173 |