- Transcript 'KH2012:KH.C5.392.v2....' >
- Transcript 'KH2012:KH.C10.517.v2...' >
- Transcript 'Boleac.CG.SB_v3.S157...' >
- Transcript 'Moocul.CG.ELv1_2.S38...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g60244.01.t
Possible name(s)
TNC; TNXB
Gene model
Location
chr5 [9,316,308 / 9,318,953]
Amino acid sequence
Length: 326
>Boschl.CG.Botznik2013.chr5.g60244.01.p
MIALLLKITSPLILLVSAHSPFKGIVCEQCDQWCINPSEVIAREGRIGKAGPRGRPGPPG
PHGPIGNPGPVGARGVAGAKGALGLRGITNMTEIEQLIERRIESALQSLTITSCRDITRQ
SAISRNRTGGIFEVYLPNRSGKNVYCDTTTDGGEWLVLQRRLIGDENFFRGWNDYVSGFG
DPRNDFWIGLETLHQLTSRSENELRIDLIRNDGVHLYAKYSFFKVGPATDKYRLTVSGYS
GNATNSFEYQHNGKQFSTKDSDNDLNPSKSCANTWKGAWRYNTCNSLYSNLNGLYGASAI
HGVSWFNRDAGIWTYMKFAEMKFRPM
Nucleotide sequence
Length: 981
>Boschl.CG.Botznik2013.chr5.g60244.01.t
CATGATTGCTCTCCTGCTCAAAATAACCTCGCCGCTGATATTGCTAGTGAGCGCTCATTC
CCCGTTCAAAGGCATTGTGTGTGAACAATGCGATCAATGGTGCATAAATCCGTCGGAAGT
CATCGCCAGAGAAGGGAGGATCGGTAAAGCTGGCCCGCGTGGGCGTCCTGGACCCCCTGG
TCCCCATGGACCGATCGGTAACCCTGGTCCAGTAGGAGCTCGGGGAGTCGCCGGAGCGAA
AGGTGCCCTGGGCCTCCGGGGGATAACCAACATGACTGAAATCGAGCAGCTGATAGAAAG
GAGGATTGAATCAGCTCTACAAAGCCTTACGATCACGAGTTGTCGTGACATTACTCGTCA
GTCGGCTATATCACGTAATCGGACCGGGGGAATATTCGAAGTGTATCTACCAAATCGTTC
TGGGAAAAACGTCTATTGTGACACGACGACAGATGGCGGAGAGTGGCTGGTTTTGCAAAG
GCGGTTAATTGGGGATGAAAATTTCTTCAGAGGTTGGAATGATTACGTCAGCGGTTTTGG
AGATCCACGAAACGATTTCTGGATAGGTCTTGAAACTCTCCATCAACTAACGTCGAGGTC
TGAAAATGAGCTGAGAATTGATTTGATCCGGAACGACGGCGTGCATTTGTACGCAAAATA
CAGCTTCTTCAAAGTCGGTCCAGCAACGGACAAATATCGCTTGACGGTTTCTGGATATTC
CGGCAACGCCACAAACTCATTCGAGTATCAACACAATGGAAAGCAATTCTCCACAAAGGA
CTCCGATAATGACCTGAATCCAAGTAAAAGTTGTGCGAATACATGGAAAGGAGCTTGGCG
GTACAATACTTGTAACAGTCTGTATAGCAACTTGAACGGGTTGTATGGAGCATCTGCAAT
ACACGGAGTATCCTGGTTTAACCGAGATGCAGGCATATGGACCTACATGAAGTTTGCGGA
GATGAAGTTCAGACCAATGTG
| Pfam |
Collagen (IPR008160) - T[45-87] 3.0E-7 |
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[105-326] 48.869 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[107-326] 3.4E-63 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[109-326] 4.3E-70 |
| CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[112-326] 2.45636E-82 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[125-325] 3.8E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCN1_HUMAN | 36.842 % | 176 | 1.08E-52 |
| TENA_HUMAN | 42.584 % | 160 | 6.34E-44 |
| TENX_HUMAN | 45.109 % | 156 | 2.89E-42 |