- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C7.159.v1....' >
- Transcript 'KH2012:KH.C4.123.v1....' >
- Transcript 'Mooccu.CG.ELv1_2.S58...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g60244.01.t
Possible name(s)
TNC; TNXB
Gene model
Location
chr5 [9,316,308 / 9,318,953]
>Boschl.CG.Botznik2013.chr5.g60244.01.p
MIALLLKITSPLILLVSAHSPFKGIVCEQCDQWCINPSEVIAREGRIGKAGPRGRPGPPG
PHGPIGNPGPVGARGVAGAKGALGLRGITNMTEIEQLIERRIESALQSLTITSCRDITRQ
SAISRNRTGGIFEVYLPNRSGKNVYCDTTTDGGEWLVLQRRLIGDENFFRGWNDYVSGFG
DPRNDFWIGLETLHQLTSRSENELRIDLIRNDGVHLYAKYSFFKVGPATDKYRLTVSGYS
GNATNSFEYQHNGKQFSTKDSDNDLNPSKSCANTWKGAWRYNTCNSLYSNLNGLYGASAI
HGVSWFNRDAGIWTYMKFAEMKFRPM
>Boschl.CG.Botznik2013.chr5.g60244.01.t
CATGATTGCTCTCCTGCTCAAAATAACCTCGCCGCTGATATTGCTAGTGAGCGCTCATTC
CCCGTTCAAAGGCATTGTGTGTGAACAATGCGATCAATGGTGCATAAATCCGTCGGAAGT
CATCGCCAGAGAAGGGAGGATCGGTAAAGCTGGCCCGCGTGGGCGTCCTGGACCCCCTGG
TCCCCATGGACCGATCGGTAACCCTGGTCCAGTAGGAGCTCGGGGAGTCGCCGGAGCGAA
AGGTGCCCTGGGCCTCCGGGGGATAACCAACATGACTGAAATCGAGCAGCTGATAGAAAG
GAGGATTGAATCAGCTCTACAAAGCCTTACGATCACGAGTTGTCGTGACATTACTCGTCA
GTCGGCTATATCACGTAATCGGACCGGGGGAATATTCGAAGTGTATCTACCAAATCGTTC
TGGGAAAAACGTCTATTGTGACACGACGACAGATGGCGGAGAGTGGCTGGTTTTGCAAAG
GCGGTTAATTGGGGATGAAAATTTCTTCAGAGGTTGGAATGATTACGTCAGCGGTTTTGG
AGATCCACGAAACGATTTCTGGATAGGTCTTGAAACTCTCCATCAACTAACGTCGAGGTC
TGAAAATGAGCTGAGAATTGATTTGATCCGGAACGACGGCGTGCATTTGTACGCAAAATA
CAGCTTCTTCAAAGTCGGTCCAGCAACGGACAAATATCGCTTGACGGTTTCTGGATATTC
CGGCAACGCCACAAACTCATTCGAGTATCAACACAATGGAAAGCAATTCTCCACAAAGGA
CTCCGATAATGACCTGAATCCAAGTAAAAGTTGTGCGAATACATGGAAAGGAGCTTGGCG
GTACAATACTTGTAACAGTCTGTATAGCAACTTGAACGGGTTGTATGGAGCATCTGCAAT
ACACGGAGTATCCTGGTTTAACCGAGATGCAGGCATATGGACCTACATGAAGTTTGCGGA
GATGAAGTTCAGACCAATGTG
Pfam |
Collagen (IPR008160) - T[45-87] 3.0E-7 |
ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[105-326] 48.869 |
SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[107-326] 3.4E-63 |
SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[109-326] 4.3E-70 |
CDD |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[112-326] 2.45636E-82 |
Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[125-325] 3.8E-54 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
FCN1_HUMAN | 36.842 % | 176 | 1.08E-52 |
TENA_HUMAN | 42.584 % | 160 | 6.34E-44 |
TENX_HUMAN | 45.109 % | 156 | 2.89E-42 |