- Transcript 'Cisavi.CG.ENS81.R54....' >
- Transcript 'Moocci.CG.ELv1_2.S57...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g62068.01.t
Possible name(s)
ANKK1; RIPK4; TRPA1
Gene model
Location
chr5 [8,682,281 / 8,685,069]
Amino acid sequence
Length: 361
>Boschl.CG.Botznik2013.chr5.g62068.01.p
MASAGKVSEISAVCNAHPDRILSRDEKEASLLHYAAAEGNTRLMDYILTDLQGKTLLDEL
DENGESPIFWAVHNDNASSVDYLIANKADPTLFNLRGEAPIHTSIRGYNRNALRALIAHK
DVVDVNQPRKFDLMRPMHVAAEFDNEDAANDLLLAGAKLCRGCHQGRRPLHIAALHGSKK
VMKLLVRKCVEFGYTHDQILSFCDNECCNPLHCAVLGGNIEAIEMCLEYGGKLDAQQFDG
TTAMHIVCAQGDYDVVVRMFELDYEQAKKTLSIQDKQQHTPLHKAAMYGHADIVKYLVEH
GANLEIMDSDENTSLLIAASRGNWISLQHLIELGANFMVKVDNDQCILLYLYNMSGRAVQ
K
Nucleotide sequence
Length: 1,086
>Boschl.CG.Botznik2013.chr5.g62068.01.t
GATGGCTTCTGCGGGAAAGGTATCTGAAATATCAGCAGTGTGTAATGCTCACCCTGATCG
CATATTAAGTAGAGATGAAAAGGAAGCATCGCTGCTCCACTACGCTGCCGCGGAGGGGAA
TACTAGGCTGATGGACTATATTCTTACAGACCTACAAGGGAAAACAGTGTTGGATGAACT
GGATGAAAATGGGGAATCTCCGATATTTTGGGCAGTGCATAATGACAACGCCAGTTCTGT
GGATTATTTAATCGCCAATAAGGCGGATCCTACGTTGTTTAACCTCCGAGGCGAAGCCCC
AATTCACACAAGTATCCGCGGATATAATAGGAATGCGTTGAGAGCTTTGATAGCACACAA
GGATGTTGTCGACGTCAATCAACCCCGGAAATTTGATTTGATGAGGCCGATGCACGTCGC
TGCCGAATTCGACAACGAGGATGCTGCAAATGATCTTCTTCTGGCGGGTGCAAAGTTATG
CCGTGGTTGTCATCAAGGAAGAAGACCATTACATATCGCCGCACTGCACGGATCAAAAAG
GGTTATGAAACTCCTTGTGCGAAAATGTGTGGAATTCGGATATACCCATGACCAGATACT
GTCCTTCTGTGACAATGAGTGTTGCAATCCTTTGCACTGTGCTGTGTTAGGCGGCAATAT
TGAAGCCATCGAAATGTGTCTAGGGTACGGTGGAAAATTAGACGCCCAACAATTCGATGG
TACGACTGCCATGCATATCGTCTGCGCTCAGGGAGATTACGATGTGGTAGTACGAATGTT
CGAACTGGACTATGAGCAGGCAAAGAAAACGTTATCCATCCAAGACAAACAACAACATAC
ACCGTTGCACAGAGCTGCAATGTATGGTCACGCTGATATTGTCAAATATTTGGTGGAACA
TGGAGCCAACCTCGAGATAATGGATTCGGATGAAAATACGTCATTGTTGATAGCTGCCTC
ACGAGGCAATTGGATATCGCTACAGCATCTTATAGAACTTGGAGCAAACTTCATGGTGAA
GGTAGATAATGATCAATGCATTCTTTTGTATCTATATAACATGTCCGGTAGGGCTGTTCA
AAAATA
| PANTHER |
TRPA1/painless (IPR030288) - T[4-354] 3.3E-72 |
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[21-193] 4.9E-30 - T[194-358] 4.9E-35 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[24-348] 9.22E-48 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[25-93] 1.5E-7 - T[211-308] 8.8E-15 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[27-342] 53.505 |
| SMART |
Ankyrin_rpt (IPR002110) - T[27-56] 370.0 - T[63-92] 0.032 - T[96-125] 270.0 - T[132-161] 170.0 - T[165-194] 0.035 - T[206-235] 0.0066 - T[239-268] 100.0 - T[277-306] 2.0E-7 - T[310-339] 27.0 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[58-186] 7.26208E-19 - T[136-256] 2.47052E-19 - T[203-331] 2.44739E-26 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[165-197] 9.698 - T[277-309] 14.746 |
| PRINTS |
Ankyrin_rpt (IPR002110) - T[166-181] 3.7E-6 - T[293-307] 3.7E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRPA1_HUMAN | 31.804 % | 172 | 1.03E-47 |
| RIPK4_HUMAN | 28.346 % | 100 | 6.48E-23 |
| ANKK1_HUMAN | 27.331 % | 99.4 | 1.16E-22 |