Aniseed - Transcript Card

Transcript 'Moocul.CG.ELv1_2.S76...' >
EST 'AHC0AAA229YC07_RM1' >
Transcript 'Phmamm.CG.MTP2014.S2...' >
Transcript 'KH2012:KH.C5.42.v3.A...' >
Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr5.g71342.01.t

Possible name(s)

COX6C

Gene model

Boschl.CG.Botznik2013.chr5.g71342

Location

chr5 [2,026,517 / 2,027,359]

Sequences

Amino acid sequence

Length: 76

>Boschl.CG.Botznik2013.chr5.g71342.01.p
MIPKPEMRRMGLKLFKRWAPPLMALTLASYVGCYFALYDRHKKQYENYVANLNPDKLYDE
MREYGVFKSVKASWQE

Nucleotide sequence

Length: 231

>Boschl.CG.Botznik2013.chr5.g71342.01.t
TGATCCCGAAGCCCGAGATGCGAAGAATGGGACTGAAACTATTCAAAAGATGGGCTCCTC
CACTGATGGCTTTGACTCTCGCTTCCTACGTTGGATGCTATGTTGCGCTATACGATCGCC
ATAAGAAACAATATGAAAACTACGTCGCTAATCTAAACCCAGACAAGCTCTACGACGAAA
TGAGAGAGTACGGAGTGTTCAAGAGTGTGAAAGCGTCGTGGCAAGAATAAG

InterProScan

Gene3D	Cytochrome_c_oxidase_VIc_sf (IPR037169) - T[1-71] 1.3E-12
Pfam	Cytochrome_c_oxidase_VIc/VIIs (IPR034884) - T[2-70] 4.0E-15
SUPERFAMILY	Cytochrome_c_oxidase_VIc_sf (IPR037169) - T[3-71] 1.09E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value