- Transcript 'KH2012:KH.C9.417.v1....' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C6.103.v1....' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr5.g71765.01.t
Possible name(s)
LNX2; LONRF3; RNF146
Gene model
Location
chr5 [2,552,306 / 2,554,120]
Amino acid sequence
Length: 189
>Boschl.CG.Botznik2013.chr5.g71765.01.p
MDTSNDDVPALPRDFTLECAICMQPFVQPVQLPCSHTFCFLCAKGIALQRQPCALCRAPI
PMDLLTMPSKFQAKDRPAYPQEDSIEEHVWYYQGHKGWWQYDERTSVEIEEAYAREDKSV
DILIAGAIYVIDFEGMVQYQRNSNSRKRKIKRDTIGAEKKGVAGMAVADQSGPSSTATGK
RRPPVGDGH
Nucleotide sequence
Length: 570
>Boschl.CG.Botznik2013.chr5.g71765.01.t
TGGACACTTCGAACGACGATGTACCGGCTCTCCCGCGAGATTTTACGTTAGAATGCGCCA
TATGCATGCAACCGTTCGTTCAGCCTGTTCAGTTACCGTGTTCCCACACATTCTGTTTCC
TATGCGCAAAGGGTATTGCTCTGCAACGTCAGCCCTGCGCATTATGTCGCGCTCCGATAC
CAATGGACCTGCTGACCATGCCTTCCAAATTTCAAGCCAAGGATCGACCGGCCTACCCAC
AAGAAGACAGCATTGAAGAGCACGTTTGGTATTACCAAGGTCACAAAGGCTGGTGGCAGT
ATGACGAAAGGACGAGTGTGGAAATCGAAGAGGCGTACGCTCGGGAAGACAAAAGCGTGG
ACATCTTAATTGCGGGAGCGATCTATGTAATAGACTTTGAAGGCATGGTTCAGTATCAAC
GGAACTCAAATTCTCGGAAGCGAAAGATCAAACGAGACACTATCGGTGCCGAAAAGAAAG
GGGTTGCCGGAATGGCCGTTGCTGATCAAAGTGGACCTTCCAGTACTGCGACTGGCAAGA
GACGCCCGCCTGTGGGAGATGGCCACTAGC
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[3-86] 4.2E-14 |
| PANTHER |
RNF146 (IPR033509) - T[16-167] 5.4E-61 |
| SMART |
Znf_RING (IPR001841) - T[19-56] 1.5E-6 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[19-57] 11.073 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[34-43] . |
| ProSiteProfiles |
WWE-dom (IPR004170) - T[75-152] 21.505 |
| SMART |
WWE-dom_subgr (IPR018123) - T[85-160] 2.2E-23 |
| SUPERFAMILY |
WWE_dom_sf (IPR037197) - T[86-165] 1.83E-27 |
| Gene3D |
WWE_dom_sf (IPR037197) - T[87-168] 1.4E-28 |
| Pfam |
WWE-dom (IPR004170) - T[88-152] 7.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RN146_HUMAN | 52.027 % | 172 | 5.31E-53 |