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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S41...' > 
  2. Transcript 'Moocci.CG.ELv1_2.S64...' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'KH2012:KH.C5.166.v1....' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr6.g14482.01.t

Possible name(s)

LRRC74A; LRRC74B; NLRC3

Gene model

Boschl.CG.Botznik2013.chr6.g14482

Location

chr6 [8,919,916 / 8,924,135]

Sequences

Amino acid sequence

Length: 339

>Boschl.CG.Botznik2013.chr6.g14482.01.p
MKKPTLNMSHHGLGPKGAKAISAPLVVNTSIIDLNIEDNWISGEGAKDIAEMLLENCYIA
TINLAQNKLGTRGAEYMRDMLMENSSLKSVNLSANDFKDTDAMFFADAFRVNFKLKEFDL
SKNAFCEVGGEWLGQGIAANESIEYLNLSWNHLRLKGALAVAAGMKINITIKKLDLSWNG
FADEGATAMAEALKTNNTLTWLDLSHNRITGEGAKYLAKALLVNDTLRTLRIGDNPIDPE
SAYALLRAIAENERSSMEDLDLTGVNVNEAFKKLALQLSQRSRASTSRTSFRYNINRTED
LIRVVQILIPWMSFRTSLKRRGFDSLTSSGVSIRTSAGE

Nucleotide sequence

Length: 1,020

>Boschl.CG.Botznik2013.chr6.g14482.01.t
CATGAAGAAACCCACTTTGAACATGAGTCATCATGGACTGGGGCCGAAAGGAGCCAAAGC
AATATCCGCGCCTTTAGTGGTAAACACGTCAATCATCGATCTAAATATCGAAGACAATTG
GATTTCTGGAGAAGGTGCAAAAGACATCGCGGAAATGCTTTTAGAGAACTGCTACATAGC
TACCATGAATTTAGCTCAAAACAAGCTCGGCACGAGAGGAGCGGAATACATGCGTGACAT
GTTAATGGAAAATTCGTCCTTAAAATCCGTCAACCTGTCAGCGAACGATTTCAAGGACAC
TGACGCCATGTTCTTCGCCGACGCGTTCAGAGTCAATTTCAAGCTCAAGGAATTTGATCT
TAGCAAGAACGCGTTTTGCGAGGTAGGGGGCGAGTGGCTCGGGCAAGGTATCGCTGCTAA
TGAGTCTATTGAGTACTTGAACTTGAGTTGGAATCATCTGAGACTAAAGGGCGCATTGGC
GGTGGCAGCCGGTATGAAAATAAACATCACGATCAAGAAGTTGGATTTGTCCTGGAACGG
ATTCGCTGACGAAGGCGCCACGGCGATGGCGGAAGCGCTGAAGACAAACAACACTTTGAC
TTGGCTCGATCTGAGTCACAATCGCATCACGGGAGAAGGAGCGAAATACCTGGCAAAGGC
GTTGCTAGTAAACGACACCTTGCGGACGCTGAGAATAGGTGACAACCCCATTGATCCAGA
GAGTGCGTACGCCCTCTTGCGGGCTATCGCTGAAAACGAACGTTCGTCAATGGAAGATTT
GGACCTGACGGGCGTAAATGTCAACGAGGCGTTTAAAAAATTGGCCCTGCAATTGTCGCA
ACGTAGCCGCGCCAGCACTAGTCGTACTAGCTTCCGATACAATATCAACAGAACAGAAGA
TTTGATACGTGTGGTACAGATACTGATCCCATGGATGTCATTCAGGACTTCCTTGAAAAG
AAGAGGCTTCGACTCATTGACCTCTTCAGGAGTTTCGATAAGGACCTCAGCTGGCGAATA

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[4-91] 7.6E-20 - T[92-185] 4.9E-19 - T[186-308] 9.1E-24
Pfam
Leu-rich_rpt (IPR001611) - T[5-22] 0.16 - T[28-50] 0.054 - T[84-106] 0.13 - T[140-162] 0.015 - T[168-190] 6.8E-5 - T[195-218] 1.6E-5 - T[224-245] 0.13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LR74A_HUMAN 43.796 % 231 2.42E-72
LR74B_HUMAN 40.37 % 195 3.69E-59
NLRC3_HUMAN 31.429 % 136 2.12E-35