- Region 'REG00000202' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr6.g44248.01.t
Possible name(s)
BMP7; LEFTY1; LEFTY2
Gene model
Location
chr6 [6,705,282 / 6,710,494]
Amino acid sequence
Length: 404
>Boschl.CG.Botznik2013.chr6.g44248.01.p
MTRVLTVIMYWMVYSKYVPAVSGQTLLNARFTNYMETIENVDRNLLDLKNAMLQHTGLHD
VPSISPEERNNFQIPTHVKKQYEELRMQHEKRHRTKRSSLANLFGSVHANPGIQGDIVYS
DPYIENLQFEMDGRIPRGTVVTMAELRLFKKVADLEKLRWIGRRQGRRYRNLHPSVFLRN
HPGRFMKPVRHARVSIYHNLFNPDGTVKSTLVDSRKIHVNGSGWQAFDVTNAVHQWQLHP
TRVMTMTLEMWIEGTRPTRHAANIAKLVRFTGQKERLRGQGYRPELVVFTREERTSRVRE
CRPNSNPKRRKCCRDNHYVSFRDIEWTKLWILEPAGYEAFRCDGKCSASRRKGFSRSCSV
AESAPLPVMYMIKRDDVTSVEVTEFPNMIVTRCGCSLDSVFLSS
Nucleotide sequence
Length: 1,215
>Boschl.CG.Botznik2013.chr6.g44248.01.t
TGACCCGCGTCCTAACAGTAATAATGTACTGGATGGTGTACAGTAAATATGTACCTGCAG
TCTCAGGACAAACTCTTTTAAACGCGCGGTTTACGAACTACATGGAAACCATTGAAAACG
TGGACCGGAATTTGTTGGATTTGAAGAATGCGATGCTGCAGCATACTGGTTTGCATGACG
TACCTAGCATATCTCCAGAGGAACGTAACAACTTCCAAATCCCGACGCACGTTAAGAAGC
AGTACGAGGAATTGAGGATGCAACACGAGAAGAGGCATAGAACCAAACGATCCTCGTTGG
CGAATCTTTTCGGCTCAGTACATGCAAATCCAGGAATCCAAGGAGACATCGTCTACTCCG
ACCCGTACATTGAGAATTTGCAGTTTGAGATGGACGGCAGAATACCGCGCGGCACCGTAG
TCACGATGGCCGAGTTGAGGTTGTTCAAGAAAGTGGCGGACCTCGAGAAGCTCCGCTGGA
TCGGCAGGAGACAAGGGAGAAGATACAGGAATCTCCATCCGTCTGTGTTTCTGCGTAATC
ACCCGGGCAGGTTCATGAAACCGGTGCGCCACGCGAGAGTGTCGATTTATCACAATCTGT
TCAATCCCGACGGCACCGTCAAATCCACGTTAGTAGATTCGAGGAAAATCCACGTCAACG
GATCAGGCTGGCAGGCATTCGACGTCACCAACGCCGTCCACCAATGGCAGTTGCATCCGA
CCAGAGTGATGACCATGACGCTCGAGATGTGGATTGAAGGGACCAGACCCACGCGGCACG
CGGCCAACATCGCTAAACTTGTCAGATTCACTGGGCAGAAAGAACGGCTTAGAGGTCAAG
GCTACAGGCCGGAATTGGTAGTTTTCACCAGGGAAGAGAGAACCAGTCGGGTCAGAGAGT
GCCGGCCTAACTCCAATCCGAAGCGGCGGAAGTGTTGCCGAGACAACCATTACGTCAGTT
TCCGCGACATCGAATGGACGAAACTCTGGATTTTGGAACCGGCCGGCTATGAAGCGTTCC
GTTGCGACGGGAAATGCTCGGCCAGTCGGCGGAAAGGATTTTCGCGTTCTTGCTCTGTGG
CAGAGAGCGCGCCGCTGCCTGTGATGTATATGATCAAACGCGACGACGTGACTTCGGTCG
AAGTAACTGAATTTCCTAATATGATCGTGACGCGGTGCGGTTGTTCGTTAGACAGCGTGT
TTCTATCTTCTTGAT
| PIRSF |
LRDF (IPR003942) - T[28-403] 5.4E-115 |
| PANTHER |
TGF-beta-rel (IPR015615) - T[46-398] 9.0E-108 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[46-257] 9.7E-17 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[291-396] 22.628 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[300-396] 1.6E-22 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[304-395] 6.45E-18 |
| Pfam |
TGF-b_C (IPR001839) - T[311-395] 1.4E-11 |
| SMART |
TGF-b_C (IPR001839) - T[312-396] 2.9E-9 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[331-346] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LFTY2_HUMAN | 29.315 % | 142 | 8.64E-39 |
| LFTY1_HUMAN | 28.219 % | 134 | 7.18E-36 |