- Transcript 'Cisavi.CG.ENS81.R107...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr6.g55040.01.t
Possible name(s)
CHDH
Gene model
Location
chr6 [4,060,502 / 4,065,056]
Amino acid sequence
Length: 602
>Boschl.CG.Botznik2013.chr6.g55040.01.p
MKKSSFLLVPIIGFALLDMHAQYLSIVVDEPDDVYDFIIVGGGTTGSVVARRLSETNIFK
VLLLEAGSEYMHDPFVNIPLLTLLNRGRWVDWLFKTESTKPYSNIMKDNACDISRGKVLG
GSSAINYQLYSRGSPEDYDSWSRQGAEGWDYHSVLPFFKKSEKSHHIYPVEDYYHGNDGP
LKVNHMEKMGLTEAFISAAEQLGLSSIKDHNSQSIVGVSPQQTTVHRGMRQSSDKAFLYP
VASSRKQHLHIVVNAHVMRINFKTGPLGQKIATGVEFTKNGVVRNITARKEVILSAGTFG
TPQILMLSGIGDRVELQKHGINVVHHLPGVGRNYQDHIFFPVNFHARNLTYGDTASFEKI
LFSFPDWILNGRGPLGTMGMAVANFMVPKTPKTTSLPDIQALLLPAESGPLLHRIVTHSY
SYSSDVFDYESAYSDRDGVLFSFFIYSILLHPKSSGTVTLRSPNPFDXPLIDPNLYSNPE
DLKTMIAGIKWIIGAENTPSFKLKKAKFVNIVKQCNATVKDDSFYKCLVMSESQLYHGCC
TAKVGKHEDKFAVVDPQLRVYGVDGLRLADASVMPHIISGPLQATCYMIGEKTAAMVLDS
YS
Nucleotide sequence
Length: 1,809
>Boschl.CG.Botznik2013.chr6.g55040.01.t
AATGAAAAAGTCTTCATTTCTTCTTGTGCCAATCATCGGATTTGCTTTACTTGATATGCA
TGCTCAATATTTAAGCATTGTCGTTGACGAACCTGATGATGTATACGACTTTATTATTGT
TGGGGGCGGGACAACAGGATCGGTTGTAGCTAGACGTTTGTCAGAAACAAATATTTTCAG
AGTTCTGTTACTTGAAGCTGGTTCGGAATACATGCACGATCCCTTTGTAAACATTCCACT
TTTGACATTGCTGAATCGTGGCCGATGGGTTGACTGGCTTTTCAAAACGGAAAGCACGAA
ACCGTACTCGAATATCATGAAGGACAAGGCATGCGATATTAGCAGAGGAAAAGTTTTGGG
AGGGAGCAGTGCCATCAATTATCAATTATATTCACGAGGAAGCCCTGAGGATTACGATTC
CTGGTCACGTCAAGGAGCAGAAGGATGGGACTATCACAGTGTACTGCCTTTCTTTAAGAA
GTCTGAAAAAAGTCATCACATCTATCCCGTCGAGGATTATTATCATGGAAATGACGGGCC
GTTAAAAGTCAATCACATGGAAAAAATGGGACTTACTGAAGCATTTATTTCTGCTGCTGA
ACAGTTAGGTCTCTCTAGTATCAAAGATCACAACTCACAAAGTATTGTCGGCGTTTCGCC
ACAGCAAACAACAGTACACAGAGGTATGCGTCAAAGTTCAGATAAGGCGTTTCTTTACCC
TGTTGCTAGCTCAAGAAAACAGCATTTGCATATTGTAGTCAATGCACATGTTATGCGAAT
CAATTTCAAAACCGGACCGTTGGGTCAGAAAATCGCAACTGGCGTGGAATTTACGAAAAA
TGGAGTCGTACGTAACATTACAGCAAGAAAGGAAGTGATACTCAGTGCTGGTACTTTTGG
AACTCCCCAGATTTTAATGCTGTCCGGGATTGGAGATAGAGTGGAGTTGCAGAAACATGG
GATTAATGTCGTCCACCATCTACCTGGAGTTGGACGAAATTATCAAGATCATATATTCTT
CCCAGTAAATTTTCATGCTCGTAATCTTACTTATGGAGATACCGCATCATTCGAAAAGAT
ATTATTTAGTTTTCCTGATTGGATTCTTAATGGCCGTGGGCCTCTAGGCACTATGGGCAT
GGCAGTAGCTAATTTCATGGTTCCTAAAACACCCAGAACAACATCTTTGCCTGATATCCA
GGCCTTACTTCTGCCTGCCGAAAGTGGCCCATTACTGCATAGGATTGTTACACACTCATA
TAGTTACTCATCAGAGGTCTTCGATTACGAAAGTGCATACTCTGACAGAGACGGGGTTTT
GTTTTCATTTTTTATCTACTCCATATTACTTCATCCCAAAAGTTCTGGGACAGTGACACT
CAGATCGCCGAATCCATTTGATCCNCCACTGATTGATCCAAATCTGTATTCCAACCCAGA
AGATTTGAAAACCATGATAGCAGGAATAAAGTGGATCATCGGGGCGGAAAATACACCATC
CTTCAAGTTGAAGAAAGCGAAGTTTGTTAACATCGTTAAGCAATGTAATGCGACTGTGAA
AGGCGACAGCTTTTACAAGTGTCTTGTAATGAGCGAATCACAGCTGTATCATGGCTGCTG
CACAGCAAAAGTTGGCAAGCACGAAGACAAGTTCGCAGTTGTAGATCCTCAACTAAGGGT
TTATGGAGTAGATGGCTTACGCCTTGCAGACGCATCCGTGATGCCTCATATTATCTCCGG
CCCGCTTCAAGCAACATGTTATATGATTGGAGAGAAGACTGCAGCCATGGTTCTTGACAG
CTATTCATA
| PIRSF |
GMC_OxRdtase (IPR012132) - T[14-602] 1.1E-142 |
| SUPERFAMILY |
FAD/NAD-bd_sf (IPR036188) - T[28-331] 2.37E-73 - T[540-601] 2.37E-73 |
| Pfam |
GMC_OxRdtase_N (IPR000172) - T[35-338] 4.2E-69 |
| Gene3D |
FAD/NAD-bd_sf (IPR036188) - T[35-73] 3.1E-162 - T[115-164] 3.1E-162 - T[233-331] 3.1E-162 - T[537-597] 3.1E-162 |
| ProSitePatterns |
GMC_OxRdtase_N (IPR000172) - T[116-139] . - T[297-311] . |
| Pfam |
GMC_OxRtase_C (IPR007867) - T[452-592] 1.6E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHDH_HUMAN | 33.002 % | 271 | 4.08E-83 |