Aniseed - Transcript Card

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr6.g69910.01.t

Possible name(s)

SPIRE1; SPIRE2

Gene model

Boschl.CG.Botznik2013.chr6.g69910

Location

chr6 [30,276 / 37,860]

Sequences

Amino acid sequence

Length: 502

>Boschl.CG.Botznik2013.chr6.g69910.01.p
MIADIAALFCNDANLPDYGPIRFTCELIITGFMTYETARKGLPRTNASEIAADTRRTKRK
LDAPPYAAQFGVAVSSTDFDESDTDSEDTSDSDSSYMLGSSTPESPLNDDEPQSFQRHNR
DSNPCSLRSSGTSGVSSGGADENDPSNEKNKSFHRNTSTVRQKKVLPVEMPDYSASGETR
YRKFSSRTGGVKRAHTFSAKSTEQENPLCAVRPTWRELRAKAAKKAAMAFEDSDEVLPLP
PRALVASPLRKIHEDRGWTQMQKRPDDYPRGQGFLNRERVQYVNITTDELIAIRKKLVAH
DLEQYQDRGQLYSLLKKGKICFNCRVREFNIFWWARNCQICEQKICSKCMRKVETPFGKN
LEANVQDLKPTLATESYGYKQSYSAQQSSSSRSFGMSLSALLDRGNGQQTGTLKKPPTLD
SQKLRKMDVCEACQTLVVRVLASNESQTNANHLPGGDCLKRSSSSVGGLHRPTKTLARSS
TSVGTSGMQGLRAVSKYRPIET

Nucleotide sequence

Length: 1,509

>Boschl.CG.Botznik2013.chr6.g69910.01.t
GATGATTGCAGATATAGCAGCTTTGTTTTGTAACGACGCCAATTTGCCGGATTACGGCCC
GATCCGTTTCACCTGCGAGCTTATAATTACCGGTTTTATGACGTATGAAACCGCACGGAA
AGGTCTTCCGAGAACGAACGCTAGCGAGATCGCCGCTGATACGAGAAGGACAAAGCGAAA
ACTTGACGCGCCGCCGTATGCCGCGCAATTCGGGGTCGCCGTGAGCTCCACGGACTTTGA
CGAGTCTGACACGGACTCGGAAGATACCAGCGACAGCGATAGCAGTTACATGTTGGGCTC
CAGCACGCCCGAATCTCCGTTGAACGACGACGAACCGCAGTCATTCCAACGTCACAATAG
AGACTCGAACCCGTGTTCTCTCAGGTCGTCAGGAACGTCCGGGGTGTCGTCGGGTGGTGC
GGACGAAAACGACCCGTCCAATGAGAAAAACAAGTCATTTCACAGAAATACGTCGACTGT
GCGTCAGAAAAAAGTTCTTCCGGTCGAAATGCCAGACTACTCAGCGTCGGGTGAGACCCG
GTACCGCAAATTCTCCTCGCGTACCGGCGGTGTGAAGCGCGCTCACACCTTCTCGGCAAA
ATCTACCGAACAAGAAAACCCGCTGTGTGCGGTGCGGCCTACTTGGAGAGAGTTGCGGGC
TAAGGCTGCTAAGAAAGCGGCGATGGCATTTGAAGACAGCGATGAAGTATTACCTCTGCC
GCCACGAGCGTTGGTGGCGTCACCGCTACGGAAGATACATGAAGACAGGGGATGGACGCA
GATGCAGAAACGGCCTGATGACTATCCTCGAGGACAGGGATTTTTAAATCGCGAAAGAGT
GCAGTATGTCAATATCACCACTGACGAATTAATCGCAATACGCAAAAAGCTCGTCGCTCA
CGATCTGGAACAATATCAAGACAGGGGGCAGTTGTACTCTTTACTAAAGAAAGGAAAGAT
CTGTTTTAACTGTCGCGTGAGAGAATTCAATATCTTTTGGTGGGCGAGGAATTGCCAAAT
CTGTGAACAGAAGATATGCTCCAAATGCATGCGAAAGGTCGAAACACCGTTCGGCAAGAA
TCTCGAGGCGAATGTACAAGATTTAAAACCGACGCTAGCGACGGAATCGTACGGCTACAA
GCAATCATATTCAGCGCAGCAAAGTAGCTCATCAAGGTCGTTTGGTATGTCCTTGTCGGC
ACTACTGGACCGAGGCAACGGGCAACAGACGGGCACGTTGAAAAAGCCACCCACGTTAGA
CTCACAAAAGTTACGCAAAATGGACGTGTGCGAAGCTTGCCAGACGCTGGTTGTCCGCGT
GTTGGCGTCTAACGAATCGCAAACTAACGCCAACCACTTGCCCGGCGGGGACTGTCTCAA
ACGGTCCTCCTCCAGCGTAGGTGGATTGCACCGCCCCACGAAAACACTGGCCCGATCGAG
CACCAGCGTGGGCACTTCAGGTATGCAAGGGTTGCGGGCCGTAAGTAAGTACCGCCCGAT
AGAAACGTA

InterProScan

PANTHER	Spire (IPR029901) - T[91-451] 6.1E-34
PANTHER	Spire1 (IPR029905) - T[91-451] 6.1E-34
SUPERFAMILY	Znf_FYVE_PHD (IPR011011) - T[317-359] 7.2E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SPIR1_HUMAN	42.857 %	85.1	1.87E-17