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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S5...' > 
  3. Clone 'mae3k19' > 
  4. Clone 'cieg081g02' > 
  5. Transcript 'Boschl.CG.Botznik201...'

Transcript Model

Transcript Id

Boschl.CG.Botznik2013.chr7.g04662.01.t

Possible name(s)

SPSB1; SPSB2; SPSB4

Gene model

Boschl.CG.Botznik2013.chr7.g04662

Location

chr7 [11,327,706 / 11,328,747]

Sequences

Amino acid sequence

Length: 305

>Boschl.CG.Botznik2013.chr7.g04662.01.p
MSRTGSRHSENGTGSTARSNRRSDSSKQSSRRHSNRERRSHHRHHSNHISSGSEPECPYR
LDVLLNMPAANKEEQIEHGWNSKDKSVNVFVKDDDLTMHRHPVAQSTDGVRGKMGFSRGL
HCWEXXXXXXSTRQRGTHAVIGVATADAPLTCVGYRSLVGADDKSWGWDLGRNKLYHGGK
YHRDEKSGCKVYPTFLDADENFVVPEKILVVLDMDEGTLSYVADGQYLGVAFSGLKGKTL
YPVISSVWGHCEVGIKYINSLNPLPLPLAEMCRHRIRMSLGKPNLHGKVEQLPLPQPVKR
YVLYR

Nucleotide sequence

Length: 918

>Boschl.CG.Botznik2013.chr7.g04662.01.t
AATGTCGCGAACCGGTTCGCGGCACTCGGAAAACGGCACCGGGTCAACGGCTCGATCAAA
CAGACGGTCTGATTCGTCGAAGCAAAGTAGCCGAAGACACAGCAATAGGGAAAGGCGCTC
TCACCACCGTCATCACAGCAATCACATCAGTTCCGGCTCAGAACCGGAATGTCCTTACAG
ACTGGACGTTTTGTTGAATATGCCAGCCGCTAATAAAGAAGAGCAAATTGAACACGGCTG
GAATTCGAAAGACAAAAGCGTCAACGTTTTCGTAAAGGACGATGACTTAACTATGCACAG
ACACCCCGTGGCTCAATCCACCGACGGCGTGCGCGGAAAAATGGGCTTTTCGAGAGGTCT
TCACTGTTGGGAAATNNNNNNNNNNNNNNNGAGTACGAGACAGCGCGGTACGCACGCCGT
CATAGGCGTCGCCACGGCGGACGCGCCTTTAACTTGCGTTGGATATCGGTCTTTAGTGGG
TGCGGATGATAAATCGTGGGGATGGGACTTGGGACGTAACAAGCTTTACCACGGCGGGAA
GTACCACCGAGACGAGAAGTCCGGGTGTAAAGTGTACCCTACCTTCTTGGACGCTGACGA
AAATTTCGTGGTCCCCGAGAAAATCTTGGTGGTTCTCGATATGGACGAAGGCACTTTGAG
CTATGTAGCGGACGGACAGTATCTCGGTGTCGCCTTTTCTGGATTAAAAGGAAAAACGCT
CTACCCCGTGATTAGCTCTGTTTGGGGTCACTGTGAAGTCGGGATTAAATATATCAACAG
TTTAAATGCTCTACCTTTACCTCTCGCGGAGATGTGCCGACACAGGATCAGGATGTCTCT
GGGCAAGCCGAATTTGCACGGCAAAGTCGAGCAGCTGCCTTTACCGCAACCCGTTAAGAG
ATACGTTTTGTACCGGTG

InterProScan

SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[57-277] 9.5E-54
ProSiteProfiles
B30.2/SPRY (IPR001870) - T[58-262] 14.219
SMART
SPRY_dom (IPR003877) - T[118-261] 5.5E-12
Pfam
SPRY_dom (IPR003877) - T[123-251] 2.2E-15
ProSiteProfiles
SOCS_box (IPR001496) - T[265-305] 11.125
SMART
SOCS_box (IPR001496) - T[265-305] 4.1E-10
Pfam
SOCS_box (IPR001496) - T[265-304] 5.0E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPSB4_HUMAN 61.176 % 319 6.51E-110
SPSB1_HUMAN 58.233 % 313 2.82E-107
SPSB2_HUMAN 50.201 % 234 1.25E-76